Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4581 ATGGGCCATGGCAATCCACATTCTTCACCCACCTTTTATTCTTTTGCTGACTCTTTCTTCTTTTCTTCTTCTTTACTTCTTCATTCATATCATTTCTTTTTCTTCTTCTCATTTCTTGGTTTTCCTCTTCAGGAAAGAAAGACCTTCTCTGTGGTGTGGAGGATTTGCTTCACTTCAATAATGGGTTCTGGTTTTTGGTTTAAAGCAATAATTAGCTTAAGGAATAGGAAGTCAAAAGATAGAAGATCAAAGAAACTAAAGGGTACTTTAGCTCCGGAGAAGCCAAGTGCATTGAAGTCGAACAAGTCTCCGGGAAATGAGTCTACTGATTTAGCAAATGGCAACCAAAATGAAAATCTCGCGTCCGTTGAAACTACTGCTGCAACAAGGATCCAGACTGCATTCCGGGCTTATAAGGCTAGAAAAGCTCTACGACGAATGAAAGGTTTTTCAAAACTGAAGAATTTAACACAAGGTTACTCTATTCAAAAGCAAGCCAGTACAACTATAACATACCTTCATTCATGGAGCAAAATACAGGGTGAGATTAGAGCTCGTCGAATCTGTATGGTGACAGAAGACAAGATCAGGCGGAAGAAACAAGAGTCTCAACTAAAACTCGAAGAAAAGCTCCATGATTTCGAGGTTGAATGGTCCGGTGGCCCTGAAACCGCGGAGGAAACCCTTGGTAGGATACATCAGAGAGGAGAAGCAGCAGTAAAGCGCGAAAGAGCCATGGCTTATGCCTTTTCTCATCAGTGGAGAGCAAACTCTAGTCAGAGCCAAGTACTAGGCAGTTACGAGCTCGGCAGAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATCGCCGCGCGTCCATGGGAAAGCCGTGTAGCTAGCATTAGCCCGAAGAAAGCTCAAAATAAACCATCATTCAAAGTTCAAAAAGATAAAAAGACATCAACATCTAAAACTCCGGTTTCGGTAACACCTCCTTCCTCCAGTGCAAAAGGGACTCCTCCTCCTCCTAAAGGAAGTACCAAAGCTAGAAGATTGTCTTTTCCAACCACAGAGAAAGAGAAAACTGTGGTTGAAGGAGGAGTGAAGTGA 1092 0.4304 MGHGNPHSSPTFYSFADSFFFSSSLLLHSYHFFFFFSFLGFPLQERKTFSVVWRICFTSIMGSGFWFKAIISLRNRKSKDRRSKKLKGTLAPEKPSALKSNKSPGNESTDLANGNQNENLASVETTAATRIQTAFRAYKARKALRRMKGFSKLKNLTQGYSIQKQASTTITYLHSWSKIQGEIRARRICMVTEDKIRRKKQESQLKLEEKLHDFEVEWSGGPETAEETLGRIHQRGEAAVKRERAMAYAFSHQWRANSSQSQVLGSYELGRANWGWSWKERWIAARPWESRVASISPKKAQNKPSFKVQKDKKTSTSKTPVSVTPPSSSAKGTPPPPKGSTKARRLSFPTTEKEKTVVEGGVK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4581 363 MobiDBLite consensus disorder prediction 81 115 - -
Psa1g4581 363 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Psa1g4581 363 PANTHER IQ-DOMAIN 9 61 355 - -
Psa1g4581 363 MobiDBLite consensus disorder prediction 347 363 - -
Psa1g4581 363 PANTHER IQ-DOMAIN 5-RELATED 61 355 - -
Psa1g4581 363 MobiDBLite consensus disorder prediction 294 363 - -
Psa1g4581 363 MobiDBLite consensus disorder prediction 99 115 - -
Psa1g4581 363 Pfam IQ calmodulin-binding motif 127 145 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4581 Psa-Chr1 350846197 350849157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4581 61 349 IQD Protein Family AT2G33990 52.249 2.44e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4581 - - var:108341135 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4581 1 350846197 350849157 Psa1g4581 1 350846197 350849157 ECH