Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4575 ATGGAGCATCCATGTATGCTTCAGCTAACGGTTTTCAAGTGCGGTGGGTTTACCCTCGGTGCAGCGATTCATCACTCGCTATGCGACGGGATGGGTGGGACTCTGTTTTTTAACTCGGTGGCTGAGTTGGCTCGCGGGGTGACTCGGATAACAGTGGAGCCTATATGGGATCGAGAAAAGTTGTTGGGTCCAAGGGATCCTCCCCGAGTGGATTCGCCGTTGATAAGAGAGTTTCTGAGTTTGGACAAAGAATTTTCGCCATATAAAGAGAATATCGGTCCTGTTAAGAGAGAGTGTTTTCATGTGAGGGATGAGTGCTTAGACAATTTCAAAAGATCGTTGTTTGATCAATCTGGATTCAACTTCACCACTTTTGAAGCTCTAGGTGCCTACATTTGGAGATCCAAGGTAAGGGCCTCACGAGTGGAGGATAAAGAGAAGGTTAAATTTGCATACTCAATAAATATACGAAGATTAATAAAGCCATCACTACCTCCTGGGTATTGGGGAAATGGTTGTGTTCCAATGTATGTTCAACTTAGTGCCAAAGATTTGATAGAGAGACCAATTTGGGAAACTGCAGAGCTAATAAGAAAGAGTAAAAGCAATGTTAGTGATGAGTATGTTCGATCCTTCATTGATTATCAAGAGCTGCATTTTGGTGATGGGATCACGGCAAGGAAATGGGTGAGTGGGTTCACTGATTGGAGGCACTTGGGTCATTCTACTGTGGATTTTGGGTGGGGTGGCCCTGTTACTGTTTTGCCACTAGGAAGAAACTTGCTTGGGAGCGTTGAACCTTGTTTCTTCTTGCCTTATTCGACTGCTAGTGCGGAGAAAAAGGATGGCTTTAAGGTTTTGGTGACTTTGAATGAGGCAGCTTTGTTTGCTTTTCGAGAAGACATGCAAATGTTTGCCGGTGGCCAAGAGACCGCACTCTTGCCGCGCATTTGA 954 0.4497 MEHPCMLQLTVFKCGGFTLGAAIHHSLCDGMGGTLFFNSVAELARGVTRITVEPIWDREKLLGPRDPPRVDSPLIREFLSLDKEFSPYKENIGPVKRECFHVRDECLDNFKRSLFDQSGFNFTTFEALGAYIWRSKVRASRVEDKEKVKFAYSINIRRLIKPSLPPGYWGNGCVPMYVQLSAKDLIERPIWETAELIRKSKSNVSDEYVRSFIDYQELHFGDGITARKWVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASAEKKDGFKVLVTLNEAALFAFREDMQMFAGGQETALLPRI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4575 317 Gene3D - 1 77 IPR023213 -
Psa1g4575 317 Pfam Transferase family 6 303 - -
Psa1g4575 317 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 1 306 - -
Psa1g4575 317 Gene3D - 83 301 IPR023213 -
Psa1g4575 317 PANTHER ACYL TRANSFERASE 4 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4575 Psa-Chr1 350697146 350699056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4575 5 258 Monolignol Biosynthesis Gene Families AT5G48930 30.418 1.08e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4575 - - gmx:100817021 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4575 1 350697146 350699056 Psa1g4575 1 350697146 350699056 ECH