Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4532 ATGGCATCCCCCAACGAAAGCTTCGTCTACACCGCCAAGCTCGCCGAACAAGCCGAACGCTACGAAGAAATGGTTGAAGCGATGAAGAAAGTCGCTAAGCTTGACGTTGAATTGACGGTTGAAGAGCGTAATCTTCTGTCTGTTGCTTATAAGAATGTTGTGGGAGGACGTAGGGCCTCGTGGAGGATTCTTTCGTCGATTGAGCAAAGGGAGGAAACGAAAGGGAACGATGTGAATGTGAATCGGATTAAGGAGTATAGGAAAAAAGTTGAATCTGAGTTGTCTGATATCTGCACTGATATCATGGCTGTGATTGATGAGCATCTCATTCCTAATTCATCTGGTGAATCTAATGTCTTTTACTACAAAATGAAGGGTGACTATTATCGTTATCTGGCTGAGTTTAAGAGTGGGGATGACAGGAAAGAGGCTGCTGATCAGTCCTTGAAAGCATATCAGGAAGCTTCCACTGCTGCAGAGACCGAGTTACCTCCCACTCATCCTGTCAGGCTGGGTTTGGCTTTGAACTTCTCTGTCTTCTATTATGAAATCTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCCAAGCAAGCATTTGATGTAGCCATTGCTGAGTTGGATTCTCTCAATGAGGAATCTTACAAAGACAGCACGCTGATTATGCAGCTTCTGAGGGACAACCTGAAATTGTGGACTTCTGACCTTCCTGAGGAAGGAGCTGAGGAACAAAAGGCCGAGTCTGCCCGAGCTCCTGTAGGAGATAATGCAGAGTAA 774 0.4587 MASPNESFVYTAKLAEQAERYEEMVEAMKKVAKLDVELTVEERNLLSVAYKNVVGGRRASWRILSSIEQREETKGNDVNVNRIKEYRKKVESELSDICTDIMAVIDEHLIPNSSGESNVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYQEASTAAETELPPTHPVRLGLALNFSVFYYEILNSPERACHLAKQAFDVAIAELDSLNEESYKDSTLIMQLLRDNLKLWTSDLPEEGAEEQKAESARAPVGDNAE* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4532 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Psa1g4532 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Psa1g4532 257 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Psa1g4532 257 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Psa1g4532 257 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Psa1g4532 257 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Psa1g4532 257 SMART 1433_4 5 245 IPR023410 -
Psa1g4532 257 Coils Coil 11 31 - -
Psa1g4532 257 Gene3D - 1 246 IPR036815 -
Psa1g4532 257 PANTHER 14-3-3 PROTEIN 5 242 IPR000308 -
Psa1g4532 257 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Psa1g4532 257 SUPERFAMILY 14-3-3 protein 6 234 IPR036815 -
Psa1g4532 257 MobiDBLite consensus disorder prediction 235 257 - -
Psa1g4532 257 Pfam 14-3-3 protein 12 232 IPR023410 -
Psa1g4532 257 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 5 242 - -
Psa1g4532 257 PIRSF 14-3-3 1 246 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4532 Psa-Chr1 349451882 349457011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4532 6 257 14-3-3 family AT2G42590 76.562 2.00e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4532 K06630 - gmx:100807980 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4532 1 349451882 349457011 Psa1g4532 1 349451882 349457011 ECH