Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4526 ATGCCGGACTTTCACGATTCTCTCTCTCCGCCGTCACGTCCTGTCCCTGTCCGTGAGGATTGCTGGTCTGAGGAAGCTTCTTCCACTCTGGTAGATGCTTGGGGTCGGCGTTACCTTGAACTCAACCGTGGTAATCTTCGTCAGAAGGATTGGCAGGATGTTGCCGATGCCGTTAACGCTCTTCATGGTCATACGAAGAAAACTCATCGCACCGATGTTCAGTGTAAGAATCGAATCGATACGATTAAGAAGAAGTATAAGATCGAGAAAGCTAGGGTTTCGTCTTCCAGTGGTGTTGTTTCTTCGTCTTGGCCTTTTTTCGAACGGTTAGATGCTTTGGTTGGACCTAATTTCAATTCGAAGAAAGCTTCCTCTTCGCCATCGCCGTCGCCGCCGATTGCTCTTGCTTTGGTTCCTCATCGGAAATTTCCTTCTTCGTCACCTGCTATTTCTGTGCCTCCGACTGCCGTCGCGCTTCCGCAGAAACGGCCGCTTGCAGCGGTGATGGATGATGGTTATTTCAGGAGGAATTATTCAGCGGTAGCCGCTGCAGCGGCTGCCGCAGAGGCTGATGAAGACGAGGAGGAAGATGAAGAAGAGGAAGTTGAGGAGGAAGAGGTGGAGGTAGAGGAAGAAGAAGGGAGGGGAAGCGAAGTCGATGAAGGGGATAAAGGGAGGGAAGGGATGAAGAGGTTGGCGAAGGCTATAGAGAGATTTGGTGAAATGTATGAGAGAGTGGAGGGACAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAAAGGATGCAGTTTGCTAAAGATATTGAAGTGCAGAGAATGCAGATGTTTATGGATACGCAAGTTCAGCTGGAGAGAATCAAGCGTGGAAAACGATCTGGGTCTAATGATATATATAATAGCTAG 903 0.4895 MPDFHDSLSPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSSGVVSSSWPFFERLDALVGPNFNSKKASSSPSPSPPIALALVPHRKFPSSSPAISVPPTAVALPQKRPLAAVMDDGYFRRNYSAVAAAAAAAEADEDEEEDEEEEVEEEEVEVEEEEGRGSEVDEGDKGREGMKRLAKAIERFGEMYERVEGQKLRQMVDLEKQRMQFAKDIEVQRMQMFMDTQVQLERIKRGKRSGSNDIYNS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4526 300 MobiDBLite consensus disorder prediction 188 217 - -
Psa1g4526 300 PANTHER OS05G0560600 PROTEIN 10 295 - -
Psa1g4526 300 MobiDBLite consensus disorder prediction 185 228 - -
Psa1g4526 300 MobiDBLite consensus disorder prediction 1 20 - -
Psa1g4526 300 Gene3D - 22 88 - -
Psa1g4526 300 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Psa1g4526 300 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 295 IPR044823 -
Psa1g4526 300 Coils Coil 181 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4526 Psa-Chr1 349174937 349179582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4526 18 300 Trihelix Transcription Factor Family AT3G14180 32.486 2.12e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa1g4526 Myb_DNA-bind_4 5.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4526 - - gmx:100815241 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4526 1 349174937 349179582 Psa1g4526 1 349174937 349179582 ECH