Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4513 ATGAAACTCTTTTACATGTTCTTGATGAATCTCCTATTGTTTATTACTCTTGCAGAATCATCATCTTCATGCAACATTGAAAACCAGAATCTTATATCAAAGGCTTTCCAATCTGTCTCTGGATTCAACTCTTCATTGTTCCAAACAAGAGGCTTATTCATCTGTTCTAAGGGTGAGAATGAGATTAACATCATAAACCTTCCATCCAAAAACCTTACCGGAAACATCTCATGGAGATACCTAAGAAACATGACAGCCTTAGAGTTTCTCGATCTCTCCGAAAATCATCTACAAGGCCAAGTCCCAAACTGGTTCTGGAAAACTACTTCATCAAGTTTATTAACAGTGAATCTCTCCAAAAACAGATTCGGTGGAAGCATTGCATTCCAAATGAAACCCTTTTCATCGTCACTACAAAATCTCAATCTCTCAAACAACAGATTCACAAACCAGGTTCATCTTTCGTCTTTTCAAAACCTTAAAATCCTCGACCTTTCCAACAACAACCTCAACGCTTTACCTTCAGGACTTCAAAATCTCACGAAACTTAACCACCTCGATCTCTCAAACTTTTCCTCAGTTTCAACATTCATTCTTGTCGTATTATCCATATTAGCAATCTTCGGTTACAGAAAGAAAAAACAACAAGCAAAAAAGAACAAATGGGCAATCTCAATTTCAAAACCAGTGATGGGATTAACAACAACCCTCAAATCAGGACCGTTCGAGTTTGAAACCGAATCCGGAACATCATGGGTGGCTGATCTGAAAGAACCATCTTCTGCAGCAGTTGTAATGTTTGAGAAACCATTGATGAACATTACGTTCGTTGATCTCATGACTGCCACGTCATACTTTGGAAAAGATTCACAGCTTGCTGAAGGTAGATGTGGGCCCGTTTACCGTGCGGTTTTACCTGGTGACATACACGTGGCAATCAAGGTTCTTGAAAATGCGAGAGACGTTGATCATGATGACTCTGTTGCAACTTTCGTTGACTTGTCTCAGCTTAAACATCCCAATCTTTTGCCTCTCTCTGGTTACTGTATTGCAGGGAAGGAAAAGCTTGTTTTGTATGAGTTTATGTCAAACGGAGATTTAGGCCGGTGGCTACACGAATTACCGACGGGAGAGACTAACGTGGAGGATTGGAGCACCGATACGTGGGAGATTCAAAACGGCGTCGGTTCACGAACTTCTTCGCCGGAGAAAATGGGATGGCCAACGCGACACCGTATCGCTATAGGTGTCGCGCGCGGTCTAGCTTTCCTCCACCATGCAGGGTCAAAGCCCGTCGTCCACGGGCATCTAGTAACATCAAACGTCCTTCTCGCCGATGACTTCGAGCCACGGATAGCCGATTTCGGGTTTAGGAAATTCGGACAACAATGTCCTCCGAATTGTTGCACTGAGACGGATGTTTATTGCTTCGGTGTCGTGCTTATGGAGCTTCTAACAGGGAAGCCTGGTACGGCGGAGACGGTTGTTTGGGTGAGGAAGCTTGTGAGAGAGGGGCATGGAGTGAGGGCACTTGATGATAGGATTAAACTCGGTGGTGGTGACTCAGAGAGTCAAATGGTGGAGAGTCTCCGAGTTGCGTATCTTTGTACCGCTGAGTCGCCGGGGAAGAGGCCTACAATGCAGCAAGTTTTGGGGCTTCTCAAAGATATTCATCCTAGAGCTAGACTCGACTGA 1695 0.4413 MKLFYMFLMNLLLFITLAESSSSCNIENQNLISKAFQSVSGFNSSLFQTRGLFICSKGENEINIINLPSKNLTGNISWRYLRNMTALEFLDLSENHLQGQVPNWFWKTTSSSLLTVNLSKNRFGGSIAFQMKPFSSSLQNLNLSNNRFTNQVHLSSFQNLKILDLSNNNLNALPSGLQNLTKLNHLDLSNFSSVSTFILVVLSILAIFGYRKKKQQAKKNKWAISISKPVMGLTTTLKSGPFEFETESGTSWVADLKEPSSAAVVMFEKPLMNITFVDLMTATSYFGKDSQLAEGRCGPVYRAVLPGDIHVAIKVLENARDVDHDDSVATFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSTDTWEIQNGVGSRTSSPEKMGWPTRHRIAIGVARGLAFLHHAGSKPVVHGHLVTSNVLLADDFEPRIADFGFRKFGQQCPPNCCTETDVYCFGVVLMELLTGKPGTAETVVWVRKLVREGHGVRALDDRIKLGGGDSESQMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPRARLD* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4513 564 Pfam Protein tyrosine and serine/threonine kinase 289 459 IPR001245 GO:0004672|GO:0006468
Psa1g4513 564 SMART LRR_typ_2 84 107 IPR003591 -
Psa1g4513 564 SMART LRR_typ_2 157 179 IPR003591 -
Psa1g4513 564 ProSiteProfiles Leucine-rich repeat profile. 159 181 IPR001611 GO:0005515
Psa1g4513 564 Pfam Leucine rich repeat 137 190 IPR001611 GO:0005515
Psa1g4513 564 ProSiteProfiles Protein kinase domain profile. 286 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4513 564 PRINTS Leucine-rich repeat signature 87 100 - -
Psa1g4513 564 PRINTS Leucine-rich repeat signature 157 170 - -
Psa1g4513 564 Gene3D Phosphorylase Kinase; domain 1 246 361 - -
Psa1g4513 564 SUPERFAMILY L domain-like 62 196 - -
Psa1g4513 564 Gene3D Ribonuclease Inhibitor 23 131 IPR032675 -
Psa1g4513 564 Gene3D Transferase(Phosphotransferase) domain 1 362 562 - -
Psa1g4513 564 ProSiteProfiles Leucine-rich repeat profile. 137 158 IPR001611 GO:0005515
Psa1g4513 564 SUPERFAMILY Protein kinase-like (PK-like) 265 554 IPR011009 -
Psa1g4513 564 PANTHER KINASE, PUTATIVE-RELATED 3 190 - -
Psa1g4513 564 PANTHER KINASE, PUTATIVE-RELATED 194 564 - -
Psa1g4513 564 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 194 564 - -
Psa1g4513 564 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 190 - -
Psa1g4513 564 Gene3D Ribonuclease Inhibitor 132 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4513 Psa-Chr1 348404446 348408633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4513 65 557 Receptor kinase-like Gene Family AT5G07280 29.623 2.60e-59 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Psa1g4513 PK_Tyr_Ser-Thr 6.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4513 - - gmx:100778920 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1626 7 116660658 116664344 Psa1g4513 1 348404446 348408633 PCT