Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4508 ATGGAAAGATCATCACTCTCTTCTTCTACTAAAAGAGGTATAAAGAAAAGAGTAGTAGAAATTCCAATGAAGGATGTGGAAGGGACTAATACTCCACCGTCCGATTCATGGGCTTGGAGAAAGTATGGTCAGAAACCCATCAAAGGCTCACCTTATCCAAGAGGATACTATAGGTGTAGCAGTTCAAAGAATTGTCCGGCAAGAAAACAAGTGGAAAGGAACCATGTGGACCCCACGGTGCTTCTTGTAACATACACTTCCGATCACAACCACGCCGTGCCTCCACCTAGAAGCTACCGTAATACAAGTAACGCCGCTGCATCGAACAAAGACTCTGAATCAGAGCAGGAGGCTGAACCTGAAACCGAGGGGAGATTTGTGGATCTTGGAGAGGTGTCGTTGATTGCTACCGCGGATGAGTTAGGAGGATGGTTGGGAGAAGTGGAGGCTATCGCGTCGCCGGGGATTTTGGAGTGTCCGGTTTTCTCGGAGCAGGAAGTGTCGATGTTGGGGGAAGAGGAGATGTCGCTGTTTGCGGATCTGGGAGAGTTGCCGGAGTGTTCGGCGGTGTTTTGGAGAGGGAGGAGTAGCGCCGGCAATGTGAGTGTGGGACCACTAGTTGAGGCAAATTGCTCGTTGTGA 642 0.4984 MERSSLSSSTKRGIKKRVVEIPMKDVEGTNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKNCPARKQVERNHVDPTVLLVTYTSDHNHAVPPPRSYRNTSNAAASNKDSESEQEAEPETEGRFVDLGEVSLIATADELGGWLGEVEAIASPGILECPVFSEQEVSMLGEEEMSLFADLGELPECSAVFWRGRSSAGNVSVGPLVEANCSL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4508 213 ProSiteProfiles WRKY domain profile. 34 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa1g4508 213 Gene3D WRKY domain 21 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa1g4508 213 MobiDBLite consensus disorder prediction 96 111 - -
Psa1g4508 213 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 207 IPR044810 GO:0003700
Psa1g4508 213 MobiDBLite consensus disorder prediction 91 124 - -
Psa1g4508 213 PANTHER OS01G0750100 PROTEIN 5 207 - -
Psa1g4508 213 MobiDBLite consensus disorder prediction 1 34 - -
Psa1g4508 213 SUPERFAMILY WRKY DNA-binding domain 30 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa1g4508 213 SMART WRKY_cls 33 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa1g4508 213 Pfam WRKY DNA -binding domain 35 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4508 Psa-Chr1 348161803 348163374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4508 10 208 WRKY Transcription Factor Family AT1G29280 49.091 2.58e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa1g4508 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4508 - - gmx:100127392 214.542