Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4505 ATGAAGAAGAGTTTCTCTGAGTTTTACCAGAAATGGATTTCAAAGCTAGAGGAAATTCAGCACCAGCTTCTGAAAGTATCCAAAAGAGAGCTGCTGATGAATGAACAAGAGCTTCAAGCACTGGTTTCAAAAGTCACGGCTCATTTGAAAGAATACTACACTGTGAAATGGAGTGCAGCACATGAAGATGTTGCGGTTTTCTTTTCGCCAACATGGGTTACTCCATTGGAAAACTCTTACCTCTGGATAACCGGGTGGAAACCGTCTACAATCTTTCGCATCATGGAAAAGTTTAACATGACAGATGAGCAGAAGGAGAAGATAGAGGGACTGAGAATGAAGACAAAGATGGAGGAAGAGAAAGTGGAGGGGGAGATGGAGAGGCAGCAAGTGGCTATGGCAGATTTGAAGATGGTGAAGCTTGCGAAAATCTCATGCAGAGCTAGAAAAGATGATGCGAGAGTTGATGGGTTGGTTGATGTGGCTTTGAAAGGTGTTTTTGGTGGTTTGGAGAAGGTAATGAAAAGTTCAGATTGTGTTAGACTTAAGACACTTAAAGGGGTTTTGGATGTTCTTAGTCCAATTCAGTCTGTTGATTTTTTGGCTGCACATATTGGTATGCAGTTGAGGTTGAGGCAATTTGGGATGAACAAGATCATTCAGAAGAATCCATAA 675 0.4163 MKKSFSEFYQKWISKLEEIQHQLLKVSKRELLMNEQELQALVSKVTAHLKEYYTVKWSAAHEDVAVFFSPTWVTPLENSYLWITGWKPSTIFRIMEKFNMTDEQKEKIEGLRMKTKMEEEKVEGEMERQQVAMADLKMVKLAKISCRARKDDARVDGLVDVALKGVFGGLEKVMKSSDCVRLKTLKGVLDVLSPIQSVDFLAAHIGMQLRLRQFGMNKIIQKNP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4505 224 PANTHER PROTEIN DOG1-LIKE 4 2 219 - -
Psa1g4505 224 Pfam Seed dormancy control 27 95 IPR025422 GO:0006351|GO:0043565
Psa1g4505 224 ProSiteProfiles DOG1 domain profile. 2 221 IPR025422 GO:0006351|GO:0043565
Psa1g4505 224 PANTHER - 2 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4505 Psa-Chr1 347934573 347935644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4505 4 212 bZIP Transcription Factor Family AT3G12250 29.245 4.61e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4505 - - gmx:100808459 285.419