Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4469 ATGAAGAGTTGTGAAGAATGGAAACCTTTTATGATAATGATAGCAATTGATGTTTCTTTTGCTGTTGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGAATGAACCATTTGGTTTTTATCACGTATCGTCTCTCGATTGCTACCGTTTTTGTCGGCTCAATCGGTTACTTTAAGGAAAGAAATAGCAGGCCGCGACTCACATTTCGAATTTTATGCTACCTCTTCTTCAGTGCCATTGTTGGAGCATCAGTCACACAATACTTCTTCCTCCTGGGGATCCAATATACTTCAGCTACATTTGCTTGCGCTTTTGTCAACATGGTGCCCGTGGTCACATTCCTATTGGCATTGCCATTTGGATTAGAGACGGTGAACATCAAATGCAACAGTGGAAGAGCCAAGATTCTTGGTACATTGGTGTGTATAGTTGGAGCATTGATGTTGACACTTTTCAAAGGAAAGGGTCTGTTTAATTTTTCTCACTCCGAGTCATCATTGAAGCTACTAGCATCTACAAGAACACAAGAGAAATGGACTGTTGGTGTCATAGCTTTGATTTTGGGAACAGTCTTTTGGTCTTCTTGGTTCATTTTACAATCTAAAATAAGTAAGAGATATCCATGCCAGTATTCTAGCACCGCAATCATGAGCTTCTTTGGAGCCATTCAATCGGCTGTCATTTGCTTGTTCATTGATCATAACTTGTCTATATGGGCTCTCAGAGGAAAGATACAAATAATTGCTATTTTGTATGCCGGAATAATTGGATCAGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTCAAGAAGAGAGGTCCGGTTTTTACTGCAGCGTTCAGTCCATTTGTTCAGATAATGGCAGCCATGATTGATATTCCTGTCTTGCATGAACAACTCTATCTTGGAAGTGTGGTGGGATCAATCTTGGTGATGATTGGATTATATATTCTTCTATGGGGTAAGAGCAAGGAAGTTCAGAAACGCTTGATTAAGCTAGCAGAGGAAGCTGAAAAAACCAAAGAACAGGAGCCACAACAACCTCAAATACAGCTCTTAACAGTGTCTTGTGACTCACGGTGTCAATAA 1089 0.4013 MKSCEEWKPFMIMIAIDVSFAVVNILLKKVLEEGMNHLVFITYRLSIATVFVGSIGYFKERNSRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVVTFLLALPFGLETVNIKCNSGRAKILGTLVCIVGALMLTLFKGKGLFNFSHSESSLKLLASTRTQEKWTVGVIALILGTVFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICLFIDHNLSIWALRGKIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGSVVGSILVMIGLYILLWGKSKEVQKRLIKLAEEAEKTKEQEPQQPQIQLLTVSCDSRCQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4469 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Psa1g4469 362 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Psa1g4469 362 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Psa1g4469 362 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016021|GO:0022857
Psa1g4469 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 324 - -
Psa1g4469 362 PANTHER WAT1-RELATED PROTEIN 9 342 - -
Psa1g4469 362 Coils Coil 323 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4469 Psa-Chr1 346994926 346997812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4469 7 253 Nodulin-like Gene Family AT3G30340 50.602 2.74e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4469 - - gmx:100803670 583.948