Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa1g4449 | ATGACTAGGGCTATTCGGAATAGGGTACTCAAAGATGCTAATGGTGATATTAGTGATCATTTACGCAACCATATTCATTTAACAAATTGTATTCACTTGAAGAACCATATGCATAAAAACAGTCCAATACTTGCTGATAGGTCTATAATGAGAGACCTTGTTGTGCTTCAAAGATCGCGTTCTCTTCGGGATCCTTCTGCGAGTCCTCCGTCATGGCATTCTCCTTCTGTGGTTGACTTGCTTTTCAAAAGGGCAGAAAATGATGCTGTGAATCAAGGGGGGAGAAGGTCGGTAGGTGTTGATAGTCGGAAGGAAGGTAGGAAACCGTCTGGAATCAGAAACTCGCCACCTTTGGTGAGTAAAGGTACATCAAGGGTTGCTCCAGGTGAGGCTAGTAGGAGTAACGATGCAGTGCCGGCGGCAACTAGTGAGCGAAGTAGTAGGAGCGGAATCGGGGATGGAAGGAGAGTTGGGAGGGAAGAATCTGGCCGGAAGAGTAATAGGCCTGATTATTTGGAAGGTATCGGTCAAGAGCAACTTCTTCATGAGGCCGGCAAAAGTTTGGCTGAAGATATTGTTTCGAGGCATTCTCAATCTTTAGAGAGAAAGAGTAGACAGCGGGGAAAGAATGTTCGAGAAGTTCAAGTTAAGACTCTTTCTGAACAGCTGAATGATGTTCCTTTGGATAGTGATGATTTGGCATCATCAAACATTCATTTTCGGGCAAGGTTTCCAACACAAGAGAAAATTGTTGAGGCACAACAAGCCAGCATGCGCAGTCATGGAAATGGAATGAATAGGACAAAAAGGCGTAAATTCCGAAGTGCGAGAAGAGCTCGGGTTGCTACAACGTCAAGAGATATTGGAGCCGAGAATGAATTGTCCGTGGCTTCAAACTCATTAGCTGAGGGTTCAGCTCACCAGAAATATCACTCGGAGGAGGTCAATGATTATGCAAATGATAATGTTACTAGAGCACCAAAAAATGGGTGTGGCATGCCTTGGAATTGGTCTAGAATTCATCATAGAGGTAAATCTTTCCTTGACATTGCTGGAAGAAGTTTGTCCTGTGGTTTATCTGACTCAAGGTTAAAGAAAGGGACATCTTTAGCTTCAAATGGAAGAAATATTTCTGTGATGCCTGTGGCAGCTGACGGCTCTAGCTCATGTACTAACTCTGAAGCAGAGGCACTGCCTTTACTAGTTGACGCATCTGGATCTCATGGAAGCACGGAAAATGCTTGTTGGGGTCGTGGTTATTCAGGCGAACTATGTATTTATGGTGACAATTTATTGAAGCAAGATATCGATTCTGATCTTGCTTCTGAAGCTAGATCTGGTAGCCAACATAATAAGTTGAGACGGAATCATCATAGTAGACACCAAAGTTTAACACAAAAGTATATTCCACGAACCTTCAGAGATATGGTTGGACAGAATTTAGTGGCACAAGCTCTTTCGAATGCTGTGATGAGACGGAAAGTTGGATTGCTGTATGTGTTTTATGGTCCCCATGGCACCGGAAAAACTTCCTGTGCTCGCATATTTGCAAGAGCTTTGAATTGCAGTTCGATAGAACACCCAAAACCTTGTGGCTTTTGCAATTATTGCATAGCACATGATATGGGAAAGAGTAGAAATATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAACATCATGGATCTACTCGATAATATGACTGTTTCCCAGCTTCCATCACAGTACAGAGTGTTTATTTTCGATGATTGTGATACTCTATCGGCTGATTGTTGGAACGCTATATCCAAGATCATTGATCGAGCACCTAGACGTGTGGTTTTTATCCTTGTCAGTACTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCAAAGTTGAAGGATTCGGATATTGTAAATACACTGCAGTGGATTGCAACCAAAGAAGGTCTCGATATTGATAAGGATGCCCTTAAACTCATCGCATCAAGGTCTGACGGATCATTGAGAGACGCTGAGATGACACTTGAACAGCTTAGTTTGCTTGGGCAAAGAATTTCCGTTCCTCTTGTTCAAGAATTGGTAGGACTTATCTCTGATGAAAAGTTGGTGGATCTGCTTGATTTGGCATTATCTGCGGACACGGTAAACACTGTAAAAAATTTGAGAGTGATAATGGAAGCAGGAGTTGAACCATTAGCTTTGATGTCACAGCTTGCCACAGTAATTACAGATATACTTGCTGGGACCTATGATTTCGCTAAAGAAAGGCGAAGAAGGAAGTTCTTCCGAAGACAACCATTGTCCAAAGAAGACATGGAAAAGCTTCGTCAAGCTTTGAAAACTTTATCTGAGGCGGAGAAGCAGTTAAGAATGTCTAATGACAAGCTAACCTGGTTGACAGCTGCATTGCTTCAACTTGCTCCTGACCAGCAGTATGGGCTGCCGACTTCATCTGATAATAGTTTCCACCATAGTCCCTTCGCTCTAAATAATGGAAATGTGAAAGAAGGTACTACTAGAAACACTGGTAAACCTGTTGAAATTCCTAACAGAACAAGACGATTATCAATGGATGCTAGAATGGAAAATTCTAATGCTGGAAACTCAACAGATAGAAGACATAGCGTCTCTGGTTTTGCTCCTCAACATACTTGTTCACATTCCACTGACAAGACTAGGATAAATGAAAGGCAGAATTTGGATAAAAGCCGCAAAGAAATCGAAGACATATGGTTAGAGGTGCTAGAGAGGATTAACTATCCTGGTCTCAAAGAGTTTTTGTATAAAGCAGGAAAGCTGATCTTCATTAGTTTTGGGGCAGCTCCAACTGTGCAACTAATGTTTAACTCTCAACTTTCAAAATCTACGGCTGAGAAGTTCACTGGTCACATCTTACAAGCATTTGAATCTGTCCTTGGATCTTCTGTAACCATAGAAATTAGATGTGAATCAAATAAAGATGCAGGCTTGCCTCTTGTATTGCCTGCTATGAATGATGGTTCATCTCAAATACGAGACTTAATTGAAATTGGCACTGAAAAGAGAAGGGGTGAAATTGTAGAAGAAGAAGAAGATGAAGAAGCCTCTCATATGGAGCACAAGAATATTGGGCAGCAGGGTATGGGACAAGTGTCGACGTCTCAAAAAACACCGATTGTTGTGTCACATAGTCAAAGTCGAAGTCTTGTAAGAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAAGCAGAAAGTCAACGAAGTGGATGGTCAAAACGTAAAGCAGTTTCTATTGCTGAAAAGCTCGAACAAGAGAATCTGAGACTGGAGCCAAGATCAAGGAGCTTGCTAGGCTGGAAAGCATCTAGAGCAACTCGTCGGAAGCTGTCGCGGTTGAAAATACGAACCCGAAAAACACGTGCATTGTTGAATCTTATCTCATGTGGGCAATGTCTCTCCACAAAATCTCCCAGATCACAACCAACTTCTGATTTCTTCATGTTCAAGCAAGATTTGTGGCCACACTACAGCAGCAAAATCAAATTCCATTTTCAGTCACCTTTATTTTCCTTGATGTACCACCTTAATATCTCACAAGACAGATAA | 3597 | 0.417 | MTRAIRNRVLKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRAENDAVNQGGRRSVGVDSRKEGRKPSGIRNSPPLVSKGTSRVAPGEASRSNDAVPAATSERSSRSGIGDGRRVGREESGRKSNRPDYLEGIGQEQLLHEAGKSLAEDIVSRHSQSLERKSRQRGKNVREVQVKTLSEQLNDVPLDSDDLASSNIHFRARFPTQEKIVEAQQASMRSHGNGMNRTKRRKFRSARRARVATTSRDIGAENELSVASNSLAEGSAHQKYHSEEVNDYANDNVTRAPKNGCGMPWNWSRIHHRGKSFLDIAGRSLSCGLSDSRLKKGTSLASNGRNISVMPVAADGSSSCTNSEAEALPLLVDASGSHGSTENACWGRGYSGELCIYGDNLLKQDIDSDLASEARSGSQHNKLRRNHHSRHQSLTQKYIPRTFRDMVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCSSIEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFENIMDLLDNMTVSQLPSQYRVFIFDDCDTLSADCWNAISKIIDRAPRRVVFILVSTSLDVLPHIIISRCQKFFFPKLKDSDIVNTLQWIATKEGLDIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMEAGVEPLALMSQLATVITDILAGTYDFAKERRRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYGLPTSSDNSFHHSPFALNNGNVKEGTTRNTGKPVEIPNRTRRLSMDARMENSNAGNSTDRRHSVSGFAPQHTCSHSTDKTRINERQNLDKSRKEIEDIWLEVLERINYPGLKEFLYKAGKLIFISFGAAPTVQLMFNSQLSKSTAEKFTGHILQAFESVLGSSVTIEIRCESNKDAGLPLVLPAMNDGSSQIRDLIEIGTEKRRGEIVEEEEDEEASHMEHKNIGQQGMGQVSTSQKTPIVVSHSQSRSLVRSKVSLAHVIQQAESQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLGWKASRATRRKLSRLKIRTRKTRALLNLISCGQCLSTKSPRSQPTSDFFMFKQDLWPHYSSKIKFHFQSPLFSLMYHLNISQDR* | 1199 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa1g4449 | 1198 | CDD | AAA | 477 | 636 | - | - | |
| Psa1g4449 | 1198 | MobiDBLite | consensus disorder prediction | 149 | 168 | - | - | |
| Psa1g4449 | 1198 | TIGRFAM | dnaX_nterm: DNA polymerase III, subunit gamma and tau | 462 | 810 | IPR012763 | GO:0003887|GO:0005524|GO:0006260|GO:0009360 | |
| Psa1g4449 | 1198 | Gene3D | - | 637 | 699 | - | - | |
| Psa1g4449 | 1198 | Coils | Coil | 772 | 799 | - | - | |
| Psa1g4449 | 1198 | Pfam | DNA polymerase III, delta subunit | 479 | 636 | - | - | |
| Psa1g4449 | 1198 | Gene3D | - | 453 | 633 | IPR027417 | - | |
| Psa1g4449 | 1198 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 194 | 1017 | - | - | |
| Psa1g4449 | 1198 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 1007 | 1123 | - | - | |
| Psa1g4449 | 1198 | MobiDBLite | consensus disorder prediction | 88 | 171 | - | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes