Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4443 ATGATGAAATGGGGTGGAACTGGAAGAAAATCTTCATCATCTTCGTCTTCATCTGGTTCTTTTTCTTGGCTTTCAAAGTTAAAACACATGAGAATCATCAATTCAGATTCAAATCATGCAAAAATGAAGCACAAGGAAAACCAGAAACCTACTACATCGGTTAATGATATTCCGTTTCCACCTTCATGTTTTGATATCGGCGGAAGGAATAGTAAGAAAACTGGAAGAAGATCACAATCACAATCACAAGGTACAATCAACTTAGAGCAGAATAATGTTATTGGTTTAGAAGATGAGAGAAAACTGCTGAATGATAAGAAGAGTTTGATCCAGGTTGATGATGAGTATGATAGAGATAAAGAATATGAAATCATAAGAAGAAGATTCGAGAGAAAAGCGCAACAGGTTTTGGAAGAACAGCTTTTGAAATTGGAAAAGGAAGCAAAGGAAGTTGAAGAACTTCAATATGAATCACCAAGAACAATTTGTACGCCAAGAACAGCAACACATTCTTCTGCTTCTTCAAATGCAGGTTTGAATTTGAAGAAGATTTCTTGTAAACCAAGCAATATTTCAGAAAACGCATCATCTGAGAAGAAGAAATTGAAGGAACATGAAGAGATGAAGATAAAGACGCAAGAAAAACAAAGGCGGAAACTGAAGAAAGTTTCGAGGGTGAAAATATATTCACCAAGGATGATATCAAAAGTTGAAATAAGCCGAATAAAAGCCTTAGAAGAAATGAGGAACAGAGCAAAACTAAAGATGAAGAGAGAAAGAAAGGAAGAGATTATGGAGGAAATTAGTATTAATACTAAACCAGAATTAGATAGTTTTGCTGTGATTAAGTGTTCATTGAATCCAAAGCAGGATTTTAGAGATTCAATGATTGAGATGATAGAAGAGAAAAGGATTAGTAAAGCAGAAGAAATGGAAGAATTGTTGGCATGTTATTTGACTTTGAATGCTGATGAGTATCATGATCTCATAATCAAAGTGTTTAGGCAGGTATGGTTTGATATGAGTCAATATGGTTTTGGTATTAATTAG 1050 0.3419 MMKWGGTGRKSSSSSSSSGSFSWLSKLKHMRIINSDSNHAKMKHKENQKPTTSVNDIPFPPSCFDIGGRNSKKTGRRSQSQSQGTINLEQNNVIGLEDERKLLNDKKSLIQVDDEYDRDKEYEIIRRRFERKAQQVLEEQLLKLEKEAKEVEELQYESPRTICTPRTATHSSASSNAGLNLKKISCKPSNISENASSEKKKLKEHEEMKIKTQEKQRRKLKKVSRVKIYSPRMISKVEISRIKALEEMRNRAKLKMKRERKEEIMEEISINTKPELDSFAVIKCSLNPKQDFRDSMIEMIEEKRISKAEEMEELLACYLTLNADEYHDLIIKVFRQVWFDMSQYGFGIN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4443 349 Coils Coil 195 223 - -
Psa1g4443 349 MobiDBLite consensus disorder prediction 73 87 - -
Psa1g4443 349 Pfam Transcriptional repressor, ovate 285 341 IPR006458 -
Psa1g4443 349 ProSiteProfiles OVATE domain profile. 281 340 IPR006458 -
Psa1g4443 349 PANTHER TRANSCRIPTION REPRESSOR OFP4 12 347 - -
Psa1g4443 349 Coils Coil 127 157 - -
Psa1g4443 349 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 347 IPR038933 GO:0045892
Psa1g4443 349 MobiDBLite consensus disorder prediction 34 50 - -
Psa1g4443 349 MobiDBLite consensus disorder prediction 34 87 - -
Psa1g4443 349 Coils Coil 242 271 - -
Psa1g4443 349 MobiDBLite consensus disorder prediction 7 22 - -
Psa1g4443 349 Coils Coil 86 106 - -
Psa1g4443 349 MobiDBLite consensus disorder prediction 1 22 - -
Psa1g4443 349 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 280 341 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4443 Psa-Chr1 345651346 345653030 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa1g4443 Ovate 6.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4443 - - cam:101515364 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4443 1 345651346 345653030 Psa1g4443 1 345651346 345653030 ECH
Psa7g1562 7 109760195 109761957 Psa1g4443 1 345651346 345653030 PCT