Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4414 ATGACTAGCTCGAGGATATTAAGTGTGAAAGCAACAATTGAAAGGTACAAAAAAGCATGTTCAGATTCATCTGGCACTGGATCTGCTTCTGAGGCTAATGCTCAGTTTTACCAACAAGAAGCAGATAAATTGCGTGTCCAAATTAGTAACTTGCAGAATAACAACAGGCAAATGATGGGTGAATCTTTGGGATCTATGAATGCAAAGGAACTCAAGAATCTGGAGTCTAAATTAGAAAAAGGAATAAGTAGAATTCGTTCCAAAAAGAATGAGCTGTTATTTGCTGAAATTGAATACATGCAGAAGAGGGAGATAGATTTGCACAATAACAACCAACTTCTGAGAGCAAAGATAGCTGAAAGTGAGAGGAACCACCACCATAATATTAACTTGAGTGTATTACCTGGAGGCACAAACTATGAAACCATGCAATCTCAGACTCAGCAGCAATATGATTCTCGCGGATACTTTCAAGTTTCCGGATTACAATCCAGTAGTAGTCAGTACGGACGACAAGACCAAATGTCCCTTCAATTAGTTTGA 543 0.3849 MTSSRILSVKATIERYKKACSDSSGTGSASEANAQFYQQEADKLRVQISNLQNNNRQMMGESLGSMNAKELKNLESKLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAKIAESERNHHHNINLSVLPGGTNYETMQSQTQQQYDSRGYFQVSGLQSSSSQYGRQDQMSLQLV* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4414 180 Coils Coil 71 91 - -
Psa1g4414 180 ProSiteProfiles K-box domain profile. 34 124 IPR002487 GO:0003700|GO:0005634|GO:0006355
Psa1g4414 180 PANTHER AGAMOUSB 8 174 - -
Psa1g4414 180 PANTHER MADS BOX PROTEIN 8 174 - -
Psa1g4414 180 Coils Coil 34 61 - -
Psa1g4414 180 Pfam K-box region 31 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4414 Psa-Chr1 344531640 344534335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4414 8 180 MADS-box Gene Family AT3G58780 59.195 2.58e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4414 K09264 - gmx:732595 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4414 1 344531640 344534335 Psa1g4414 1 344531640 344534335 ECH
Psa7g1533 7 107071077 107075056 Psa1g4414 1 344531640 344534335 PCT