Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4413 ATGCTGATTTCGGTATTCATGGTTTATGGCCTAATTATAAAGATGGCACTTATCCATCTAATTGTGATTCCAATAGTTCTTTTGAGGAATCTGAGAGCTGATCCCTTTGCCAAAAAGGATTGGTATGATATCAAAGCTCCTTCAATTTTCCAGGTGAAGAATGTTGGCAAAACCCTCGTTTCTCGTACTCAGGGAGACATTATCTTTATAATGTTTTTTTATTTGATTTGGTATGTACATTGTTAG 246 0.3537 MLISVFMVYGLIIKMALIHLIVIPIVLLRNLRADPFAKKDWYDIKAPSIFQVKNVGKTLVSRTQGDIIFIMFFYLIWYVHC* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4413 81 PANTHER 40S RIBOSOMAL PROTEIN S3A 33 68 - -
Psa1g4413 81 Pfam Ribosomal S3Ae family 33 63 IPR001593 GO:0003735|GO:0005840|GO:0006412
Psa1g4413 81 PANTHER 40S RIBOSOMAL PROTEIN S3A 33 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4413 Psa-Chr1 344492118 344493002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4413 34 68 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 80.000 4.40e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4413 K02984 - gmx:100805519 71.2478