Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4402 ATGAACAGCATCATTCCCACAACATGTTTGTTCCTTCTCCTTCTTCCATTAGCCTTATGCACCAAAAACAAACAGATTTACCTTGTTGAATTTGGAGAAAACACTAATGAAGATACAACACTGCATGAAATAGAGAATACACATCGCTCTTATTTGCTTTTGGTCAAAGAAACTGAGGAAGATGCTAAAACTTCATTTCTTTATAGCTACAAACACACTTTCAATGGCTTTGCAGCATTACTTACACCAGATGAAGCCAATAACCTCTCAGGAATGGAAGGAGTGGTGTCTGTGAGAAAAAGTGAGACAAAGATGTACTCATTGCATACCACAAGGTCATGGAAGTTTGTCGGGTTAGATAAGTCATTTGATCCCTATGAAGAAAAATCCAATGAAACAAATGGAGAATTATTGGCCAAAGGAAAATATGGACAAGATATTATAGTAGGAATGATTGATAATGGTGTATGGCCAGACTCAAAGAGCTTCAGTGATGAAGGCATGGGTCCTGTTCCACAAAAATGGAAAGGAGTGTGCCAAAATGGAACTGATTTTAATTCATCTAATTGCAATAGAAAGATAATTGGAGCAAGGTACTACTTGCAAGGTTATGAAAGTATCTATGGTCCTCTAAACGAAACAGATGATTACAAATCAGCTCGCGACAAGGACGGTCACGGAACACACACATCTTCGATAGTAGCAGGGCGAGCAGTTCCAAATGCGTCAGCACTTGGAGGCTTCGCCCGTGGCACAGCCATTGGCGGAGCCCCATTAGCTCGCCTTGCAATATACAAAGCGTGTTGGGCGATAAAAGGAAAACCGAAAAACGAAGGAAACGTTTGCACGAACATTGATATGCTTAAAGCTATAGACGACGCAATCGAGGATGGTGTTGATGTTATAAGTATATCGATCGGGTTTCCTGAGCCACTTAAATATGATGATGATGTTATTGCCAAGAGTTCTTTGCAAGCGGTTAGGAAAAACATTGTTGTTGTTTGTAGTGCTGGAAATGCTGGTCCTGTTCCTCATAGTTTGTCGAATCCTGCTCCTTGGATTATTACTGTTGGTGCTAGTACTGTTGATCGTTCCTTTGTTGCTCCAATTAAGCTTAGCAATGGCACAATTGTTGAGGGTAGTTCCATTACTCCACTCCACAAAGAAAATATCTTTCGTCCATTAGTTCTAGCTAGTGAAGTTGAATATGGAGGCATAACAAGTCCAAATTCTTCGGGGTATTGTCTAGACAATACTCTTGATCCGATCAAAGTAAAAGGGAAGATAGTTTTGTGTATGAGAGGGATAGGTGGAAGATTGAAAAAAGGGTTGGAAGTTGAAAGAGCCGGTGGTTTTGGTTTCATACTTGGGAACAATAGAGCTTATGCAAATGATTTAGCTTCTGATCTTCATTTCATTCCAGCCACTGAAGTCACCTATGAGAATACCTTAAAACTTGTTCAATATATTAATTCTACCCTTAATCCAATGGCACAGCTTTTGCCTGGAACAACTGTGTTAGATACAAAACCAGCACCCTCTATGGCCTTGTTCTCTAGTAGAGGTCCCAATATAATTGACCCTAATATTCTAAAGCCTGACATAACAGCACCGGGAGTAGACATATTGGCAGCATGGACAGGTGAAGATGGACCTACAAGAATGACTGATAATGATAAACGAGTTGTTGAGTACAATATCTTCTCAGGAACATCAATGTCTTGTCCTCATGTTTCTGCAGCATCTGTTCTTCTCAAAGCCATGCACCCTACTTGGAGTCCAGCTGCTATTAGGTCAGCCCTAATGACTTCAGCAAAAACAACAGACAATACAGGAAACACAATAACAGATGAAACAGGAAACCCTACAACACCATTTGCAATGGGTTCTGGTCACTTCAACCCTAAAAAAGCATCAAATCCAGGGCTCATTTATGATGCATCCTTCACTGATTATCTTCTTTACCTTTGTAATCTCAAATTAACACAAAACATAAGCATTACATATACCTGTCCAAATGCATTACCTCAACCATTTGATCTCAACTATCCATCAATTCAAATTCATAAACTCAATTACACCAAGACTATAAGAAGGACAGTGACCAATGTTGGTGGAAGCAAAAGTGTTTACAAGTTTATTTCTAAGCCACCAAAGGAATTTACCATAAAAGCCACTCCTAGTGTTTTGAGATTTACACATGTTGGACAGGAAATGACTTTTGTCATCACAGTGACTGAAAATAGAGATGAGTTACTAAGTGAAAGTGATTCTGAGAAGTACTTTTTTGGATGGTATAGTTGGAGTGACAAATATCATGTTGTGAATAGTCCAGTGGCAGTGTCTTTTCAATAA 2355 0.3932 MNSIIPTTCLFLLLLPLALCTKNKQIYLVEFGENTNEDTTLHEIENTHRSYLLLVKETEEDAKTSFLYSYKHTFNGFAALLTPDEANNLSGMEGVVSVRKSETKMYSLHTTRSWKFVGLDKSFDPYEEKSNETNGELLAKGKYGQDIIVGMIDNGVWPDSKSFSDEGMGPVPQKWKGVCQNGTDFNSSNCNRKIIGARYYLQGYESIYGPLNETDDYKSARDKDGHGTHTSSIVAGRAVPNASALGGFARGTAIGGAPLARLAIYKACWAIKGKPKNEGNVCTNIDMLKAIDDAIEDGVDVISISIGFPEPLKYDDDVIAKSSLQAVRKNIVVVCSAGNAGPVPHSLSNPAPWIITVGASTVDRSFVAPIKLSNGTIVEGSSITPLHKENIFRPLVLASEVEYGGITSPNSSGYCLDNTLDPIKVKGKIVLCMRGIGGRLKKGLEVERAGGFGFILGNNRAYANDLASDLHFIPATEVTYENTLKLVQYINSTLNPMAQLLPGTTVLDTKPAPSMALFSSRGPNIIDPNILKPDITAPGVDILAAWTGEDGPTRMTDNDKRVVEYNIFSGTSMSCPHVSAASVLLKAMHPTWSPAAIRSALMTSAKTTDNTGNTITDETGNPTTPFAMGSGHFNPKKASNPGLIYDASFTDYLLYLCNLKLTQNISITYTCPNALPQPFDLNYPSIQIHKLNYTKTIRRTVTNVGGSKSVYKFISKPPKEFTIKATPSVLRFTHVGQEMTFVITVTENRDELLSESDSEKYFFGWYSWSDKYHVVNSPVAVSFQ* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4402 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Psa1g4402 784 Gene3D - 656 783 - -
Psa1g4402 784 ProSiteProfiles Serine proteases, subtilase domain profile. 113 639 - -
Psa1g4402 784 Gene3D - 363 507 - -
Psa1g4402 784 SUPERFAMILY Subtilisin-like 109 643 IPR036852 GO:0004252|GO:0006508
Psa1g4402 784 Pfam Fibronectin type-III domain 680 781 IPR041469 -
Psa1g4402 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Psa1g4402 784 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 19 781 - -
Psa1g4402 784 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Psa1g4402 784 Gene3D Peptidase S8/S53 domain 146 652 IPR036852 GO:0004252|GO:0006508
Psa1g4402 784 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Psa1g4402 784 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Psa1g4402 784 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Psa1g4402 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 781 IPR045051 -
Psa1g4402 784 Pfam PA domain 413 484 IPR003137 -
Psa1g4402 784 CDD PA_subtilisin_like 370 498 - -
Psa1g4402 784 Pfam Subtilase family 144 629 IPR000209 GO:0006508|GO:0008236
Psa1g4402 784 CDD Peptidases_S8_3 106 605 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4402 Psa-Chr1 344137492 344143451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4402 18 783 Subtilisin-like Serine Gene Family AT5G45650 55.013 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4402 - - gmx:100793064 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4402 1 344137492 344143451 Psa1g4402 1 344137492 344143451 ECH