Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4398 ATGGTTGTAGAAGACACCCCCAAATCCATCATCACCGACGATCAAATCACAACAAACCCTAATCGCGTTATCGAAGACGACAACAATCTTGAAGAAGGAGAGATCCTCGATGAAGACGATTCCTCCGCCACTTCCAAACCCGTCGTCCACCAACCTCACCTCCTCGAGAATTCTTGGACTTTCTGGTTTGATACCCCCGCAGCAAAATCCAAACAAGCCGCTTGGGGTAGCTCAATGCGACCCATCTACACTTTCTCCACTGTTGAAGAGTTTTGGAGCATTTACAATAACATTCATCATCCTGGTAAGTTGGCTGTGGGAGCAGATTTCTATTGTTTCAAGCATAAAATTGAACCTAAATGGGAGGATCCCATTTGTGCTAATGGTGGGAAATGGACTGCGAACTATCCGAAGGGAAAATCTGATACCAGTTGGTTATACACGTTGTTGGCAATGATTGGAGAACAATTTGATCATGGAGATGAAATTTGCGGAGCGGTTGTGAATGTAAGGGGTAGGGCTGAGAAGATTTCTATTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGAGACCATGGGCTTTATATTTCATGATGATGCAAGGAAACTCGACAGAAATGCTAAAAACAAATATGTTGTGTGA 687 0.4309 MVVEDTPKSIITDDQITTNPNRVIEDDNNLEEGEILDEDDSSATSKPVVHQPHLLENSWTFWFDTPAAKSKQAAWGSSMRPIYTFSTVEEFWSIYNNIHHPGKLAVGADFYCFKHKIEPKWEDPICANGGKWTANYPKGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRGRAEKISIWTKNASNEAAQVSIGKQWKEFLDYNETMGFIFHDDARKLDRNAKNKYVV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4398 228 Gene3D RNA Cap, Translation Initiation Factor Eif4e 45 228 IPR023398 -
Psa1g4398 228 ProSitePatterns Eukaryotic initiation factor 4E signature. 109 132 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Psa1g4398 228 Pfam Eukaryotic initiation factor 4E 55 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
Psa1g4398 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 228 - -
Psa1g4398 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 228 IPR001040 GO:0003723|GO:0003743|GO:0006413
Psa1g4398 228 SUPERFAMILY eIF4e-like 26 224 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4398 Psa-Chr1 343862915 343865502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4398 1 228 Eukaryotic Initiation Factors Gene Family AT4G18040 66.387 1.86e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4398 K03259 - gmx:100793288 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4398 1 343862915 343865502 Psa1g4398 1 343862915 343865502 ECH