Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4391 ATGGCAAAGTTTAGTTCATGTAATGGGAAGGATTTTCTATTTGTTGTTCTTTTATCATCGTATTTGTCCTTTCAAGTTGCAACATGTGGCTCCATAGTCAAGTTTCTTCCTGGATTCAATGGACCTCTTCCTTTTCTGCTTGAAACCGGGTATGTGGGAGTTGGTGAAAAAGAGGATGTGCAAGTGTTTTATTATTTCATTGAATCAGAAAACAATCCAAAGGAAGATCCTCTCATGCTTTGGCTCACTGGTGGACCTGGTTGCTCTGCTTTGTCTGGCCTTGTCTTTGAAATTGGTCCACTTGAATTTAAAAAGGAGGAGTATAATGGGAGTTTGCCTAATCTGATACTGAAACCACATTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCTGTTAACACAGGATTCACATATGCCACAACAAATTCTGGTTCACAACGAAGCGATTCGATACTAGTTCATCAAACTCATCAATTTTTCAGAAAGTGGTTAGTTGATCATCCAAAATTTCAATCAAATAAAATTTACATTGGCGGTGATTCATACTCTGGCATCCCTCTTCCAGTAATTGCTCAAGAAATTATACAAGCAAATGAAAAAGGTGTCCAGCCTTGGATTAATCTTCAGGGATATTTGTTGGGGAATGCTATGACAACTAGGAAGGAAAACAATTATGCAATCCCTTTTGCTCATGGAATGGGACTCATATCAGATGAATTATATAAATCACTCCAAATAAATTGTAAAGGCGATTATATAAATGAAGAAAGCAGAAGTATCTTATGTTCTAAAGATATCAGATTATTTGAAGAGGCTATATCAGGACTTAATACAGCTCATATTTTAGACCCACGATGTGAATGGCTTGATGATACTCAAAAAATTCAGAGGAGATCTCTAATTAAATATCCCTCCAACTTCCTCACTTCAAATCTCAGATTGCCTTCGTCGAGTTGTCGAAGTTATCCATATTTTCTTTGCGGTATTTGGGCCAATGATGACAATGTTCGTAAAGCATTGCACATACGTAAGGGTAGTATGGGAAAATGGTCTCGTTGTACCTTTAATATACCTCATGAGAAAGATATATTTAACAGTTATGATTATCATGTAAATCTCAGTAAAAAGGGCATTCGCTCACTAATTTACAGTGGAGATCATGACCTGTTAGTTCCATTCTTGGGGACACAAGCTTGGATAAGATCTTTAAATTATTCCATTGTTGATGACTGGAGACAGTGGTATGCAAATGACCAAGTTGCAGGATATACACGGGCCTACTCTAATCAAATGACATTTGCAACTGTGAAGGGTGGAGGACACACAGCTCCGGAGTATCGGCCTAAAGAATGTCTTGACATGTTTATGGTTTGTGCAGGTTGGAAGGCTCGGGTTCATGGTGGCTTAGCTTGTGTGCAGACTTCACTTTGGTATGTTTTGCTAGGTTATGATAGCAGGTATGATGTTATGTCCAGGAGGTTCACTCATTCTGGCTCATGGCAAGGCTCAAACTTGGCCAATGTTCTTGCACTAGTTTTTGCAGCATGTATGATATTGTGCATTGCTATCATCAATTCTGACTTTGTGATGTCTCTTACCTTGGTTTTGCTTCGTGTTTTGCTAAGACTAGAATCATGA 1647 0.3831 MAKFSSCNGKDFLFVVLLSSYLSFQVATCGSIVKFLPGFNGPLPFLLETGYVGVGEKEDVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLEFKKEEYNGSLPNLILKPHSWTKVSSIIFVDLPVNTGFTYATTNSGSQRSDSILVHQTHQFFRKWLVDHPKFQSNKIYIGGDSYSGIPLPVIAQEIIQANEKGVQPWINLQGYLLGNAMTTRKENNYAIPFAHGMGLISDELYKSLQINCKGDYINEESRSILCSKDIRLFEEAISGLNTAHILDPRCEWLDDTQKIQRRSLIKYPSNFLTSNLRLPSSSCRSYPYFLCGIWANDDNVRKALHIRKGSMGKWSRCTFNIPHEKDIFNSYDYHVNLSKKGIRSLIYSGDHDLLVPFLGTQAWIRSLNYSIVDDWRQWYANDQVAGYTRAYSNQMTFATVKGGGHTAPEYRPKECLDMFMVCAGWKARVHGGLACVQTSLWYVLLGYDSRYDVMSRRFTHSGSWQGSNLANVLALVFAACMILCIAIINSDFVMSLTLVLLRVLLRLES* 549
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4391 548 SUPERFAMILY alpha/beta-Hydrolases 33 459 IPR029058 -
Psa1g4391 548 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Psa1g4391 548 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Psa1g4391 548 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Psa1g4391 548 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Psa1g4391 548 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 11 455 - -
Psa1g4391 548 Pfam Serine carboxypeptidase 37 458 IPR001563 GO:0004185|GO:0006508
Psa1g4391 548 Gene3D alpha/beta hydrolase 43 465 IPR029058 -
Psa1g4391 548 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa1g4391 Psa-Chr1 343669699 343681931 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4391 27 56 Calmodulin-binding Proteins AT2G22960 73.333 1.96e-08 52.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4391 K16296 - gmx:100792006 720.309