Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4377 ATGGAGCATTTGTTAAGTCTTGTAATATGCACACTGTTGTTAGTAAAGTCAGCTGAGGGGTTTGCTGTGCCAATCGCTTATGTTCAAAGTACAGCACAAAAAGGAGCTGTTTGGTTGGATGGGAGTCCACCGGCTTACCACTTTGATAAGGGATTTGATGCCGGAATTGATAACTGTAGAGACACCCCATTAGGATCAATCAAGGTTAGGTATCGTGACGGTTCATCATTTACCAGTTATGTTGAAGCTGTTGATTCAGCAACCAATTTGCACTACAGAGGAGGAAGAATATTTGTTGTTGTCATTGAGGATTTACTAGCAAAAGGAATAAAAAATGCTAAAAATACAATTCTATCTAGGTGTCCTGCTGGAGAATTGACTTCTATTTTACAATGTGATCGCTTTAGAACTTTACTTCCTGCAGCAGCTAAAGTTAAATGCGTCTCAAATGCTGGTCATTTTATCGATGTAAAAGCGGTCTCTAGAGCACAACACATTGAACAATTCTACAGCCAAGTCGTTCAAACACATGCCTCAACAAAGAATTTGCCTTCGTCTTGCACATCAAGACTTTCGCCTGGGCTGATCACTGCCCTTCACTGTGCTGCTTCTGGTGGGTCTGTTAATGTTGTTGATGCTGTTAGGCTTCTTATAACGGCGGGTGCCCATATTAGTTGTGTTGATGCCGACGGTAATCTTCCTTTTGATGTCATTGTTGTTCCTCCCAAGCTGCAAAGAATTAAAGCAGTTCTCGAGGAACTTCTTTTGGATAATGGTTCTGATAACAGATCTGTTGGTGAGTTCTTTGGTCCGGTGTCTGTTGATGCTTCTAGTCTTGGTTCGTTTGAAAATCAGATGCCGTGCCTAGTGCTGTTCCTAGCAGTATGGAACCATTGGCTGTGGAAAAGCGCACAGGAATCAATAATTCTCCTCAATTTCAGGTGTCTGTTGATGCTTCTAGTCTTGGTTCGTTTGAAAATCAGATGCCGTGCCTAG 996 0.4207 MEHLLSLVICTLLLVKSAEGFAVPIAYVQSTAQKGAVWLDGSPPAYHFDKGFDAGIDNCRDTPLGSIKVRYRDGSSFTSYVEAVDSATNLHYRGGRIFVVVIEDLLAKGIKNAKNTILSRCPAGELTSILQCDRFRTLLPAAAKVKCVSNAGHFIDVKAVSRAQHIEQFYSQVVQTHASTKNLPSSCTSRLSPGLITALHCAASGGSVNVVDAVRLLITAGAHISCVDADGNLPFDVIVVPPKLQRIKAVLEELLLDNGSDNRSVGEFFGPVSVDASSLGSFENQMPCLVLFLAVWNHWLWKSAQESIILLNFRCLLMLLVLVRLKIRCRA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4377 331 Pfam Pectinacetylesterase 66 193 IPR004963 GO:0016787
Psa1g4377 331 Pfam Pectinacetylesterase 17 58 IPR004963 GO:0016787
Psa1g4377 331 SUPERFAMILY Ankyrin repeat 196 259 IPR036770 -
Psa1g4377 331 Gene3D - 131 278 IPR036770 -
Psa1g4377 331 ProSiteProfiles Ankyrin repeat profile. 197 229 IPR002110 GO:0005515
Psa1g4377 331 PANTHER PECTIN ACETYLESTERASE 66 195 - -
Psa1g4377 331 PANTHER PECTIN ACETYLESTERASE 3 58 - -
Psa1g4377 331 PANTHER NOTUM-RELATED 3 58 IPR004963 GO:0016787
Psa1g4377 331 PANTHER NOTUM-RELATED 66 195 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4377 Psa-Chr1 343093218 343094880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4377 1 195 Carbohydrate Esterase AT4G19420 41.975 4.59e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4377 K19882 - zju:107430580 236.884