Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4358 ATGAGTAATACTCTCATGAAATCCATATTATCATTATCAACATCTTTGTCTCTAACCCAACTAATCCCATACCTAATATGCTTTATCCTTTTCCTCCTCCTCCTTGAACAGATCTCATACCTCAACAAAAAACGTTTCATCCCAGGCCCATCTCTTGTTCTTCCTTTCATAGGCAACGCCATCCCATTGGTACGTCACCCAACAAAATTTTGGGACCTTCAATCCACCCTAGCTAAATCAACCCCTTTGGGCTTCTCAGTAAATTACCTTATTGGTAACTTCATAGTCTTCATTAGAGACACAGAACTCTCCCATAAGGTTTTCTCCAATGTTAAGCCCAACGCCTTCCATCTCGTGGGCCACCCATTCGGGAAGAAGCTCTTTGGTGAGCATAATCTTATTTACATGATGGGCCAAGAACACAAGAATCTCCGCCGTCGGATTGCTCCTAATTTCACTCCTAAGGCGCTCTCCACCTACACCTCGCTGCAGCAGATTATTATCCTCAAACATCTCAAGTCATGGGTTGAGAAAGCCCGAGAAAACTCTATACCTATCCGTGTGCTGGCCCGTGATATGAATTTAGAAACCTCTCAGACGGTTTTCGTGGGCCCGTATTTGGGCCTGAAAGCCCGTGAGAGATTCGAGCGGGATTACTTTCTATTCAACGTTGGTCTCATGAAGCTTCCCTTTGACTTTCCTGGAACCGCGTTTCGTAACGCGAGACTTGCCGTTGACCGTCTCGCCGAAGCCCTAGCCACTTGCACGGCGATGAGTAAGGCCAAGATGGAGAAAGGCGAAGAGCCTTCGTGTCTCATCGATTTCTGGATGCAGGATACGATAAGGGAGATTGAAGAGTCGAAACACAACGGAGTGACAGCGCCGCCATTCTCCACTAACGCTGAGATCGGTGGTTATCTCTTTGACTTTCTCTTCGCGGCACAGGACGCCTCCACGTCGTCGTTACTATGGGCGGTGACGCTACTTGATTCACATCCGGAGGTTCTTGATAAAGTCAGGGAGGAAGTCGCCGGAATCTGGTCGCCGGAGTCGGATACACTTATAACCGCGGAGCAGCTCAGGGAGATGAAATACACGCAAGCGGTGGCGCGTGAGGTTGTTAGATTCCGTCCTCCAGCGACTCTTGTGCCACATATAGCAGCGGAGCAGTTTCCGTTAACGGAATCATACTCGATTCCGAAAGGAGCAATCGTTTTTCCGTCGGCGTTAGAGTCATCGTTTCAGGGTTTTACTGAACCGGACCGGTTCGATCCAGACCGGTTCTCGGATGAGAGACAAGAAGATCAAATATTTAAAAGAAACTTTCTGGCGTTTGGAGCTGGGCCCCACCAATGTGTGGGCCAGAGATACGCTTTGAATCACCTTGTTCTGTTCATTGCTATGTTCACTTCGATGATTGATTTCAAAAGAGATAGAATGGACGGCTGCGATGAGATCGTGTATGTGCCCACGATTTGTCCGAAAGACGATTGCAGGGTTTTTCTGTCTAAGCGGTGCACAGAGTATCCTTCCTTCTCTGGGGTTCCGGAGCTTGGGAATTGA 1563 0.4818 MSNTLMKSILSLSTSLSLTQLIPYLICFILFLLLLEQISYLNKKRFIPGPSLVLPFIGNAIPLVRHPTKFWDLQSTLAKSTPLGFSVNYLIGNFIVFIRDTELSHKVFSNVKPNAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVEKARENSIPIRVLARDMNLETSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLAEALATCTAMSKAKMEKGEEPSCLIDFWMQDTIREIEESKHNGVTAPPFSTNAEIGGYLFDFLFAAQDASTSSLLWAVTLLDSHPEVLDKVREEVAGIWSPESDTLITAEQLREMKYTQAVAREVVRFRPPATLVPHIAAEQFPLTESYSIPKGAIVFPSALESSFQGFTEPDRFDPDRFSDERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFTSMIDFKRDRMDGCDEIVYVPTICPKDDCRVFLSKRCTEYPSFSGVPELGN* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4358 520 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 Gene3D Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PANTHER BNAA05G09340D PROTEIN 24 504 - -
Psa1g4358 520 PANTHER CYTOCHROME P450 26 24 504 - -
Psa1g4358 520 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 Pfam Cytochrome P450 48 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 SUPERFAMILY Cytochrome P450 43 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g4358 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4358 Psa-Chr1 342456170 342460653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4358 18 513 Cytochrome P450 AT2G34500 68.273 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4358 K09832 - gmx:100808148 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4358 1 342456170 342460653 Psa1g4358 1 342456170 342460653 ECH