Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4339 ATGGTTTACGAAAAATCTTACATTCAAAAGTTATTGCAAACTTGTTTTCACAACTTGTTCTCATCAATCTGTGGAAATAGACCAGAGATGGAAGATGTTATTGCTGTTAAACCTCAACTTTTACAAGTCCCTTTGCAGATGCTCATGGATGACGACAAACATATAAATGAAAACTCAAAACACTCACCAGCATTTTTCAGTGACTATGATGGACACAGAGGTTTTCAGGTTGCTAATTACTGCTGGGAGCGTGTTCATTCCGTGTTGATTGAGAAGATTGAAGCTCAATAA 291 0.3677 MVYEKSYIQKLLQTCFHNLFSSICGNRPEMEDVIAVKPQLLQVPLQMLMDDDKHINENSKHSPAFFSDYDGHRGFQVANYCWERVHSVLIEKIEAQ* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4339 96 PANTHER ALPHABET, ISOFORM E-RELATED 21 94 - -
Psa1g4339 96 Gene3D - 9 96 IPR036457 -
Psa1g4339 96 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 21 94 - -
Psa1g4339 96 SUPERFAMILY PP2C-like 12 93 IPR036457 -
Psa1g4339 96 Pfam Protein phosphatase 2C 24 94 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4339 Psa-Chr1 341759795 341760318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4339 22 94 PP2C-type Phosphatase Gene Family AT1G17550 47.297 6.41e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4339 K14497 - gmx:100812974 96.6709