LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa1g4311	ATGTTAGAGAGTGGTAGTGATCGTGATTCTGGGATGAGTTTAGAAACAGTTAATTCCAATACACAGAGAACTTCTTTAAGCAGCGCCACTGAAAGCATTTGCAGCACAAGTTTCAGCCGTCTCTCTTTCGAACTCCTTCCGTCATCCTCACCGGAGAGTCTCTCCATCAAACCTCACCGTTCCTCCGATTTTGCCTACTCCGCCATCCGCAAATCCGGTCTCACCTTCCGTGACTTCCACCTTCTCCGCCGCATAGGCTCCGGTGACATAGGCACAGTATACCTCTGTCGCTTACGTGACTCGTCCGTAAACTACATCAACGACGAGGATAGTTCGTTCTACTACGCCATGAAAGTTGTTGACAAAGACGCTGTTGCTCTCAAGAAGAAGTCACACAGAGCAGAAATGGAGAGAAAGATTCTCAAGATGCTTGATCATCCTTTTCTCCCTAGTCTCTATGCCGAGTTCGAAGCTTCTAATTTCTCTTGCATTGTAATGGAGTTTTGCTCCGGCGGTGACTTGCACTCTCTCCGTCACCGTCACCCTCGTAACCGTTTCTCTCTCTCCTCAGCACGGTTTTACGCGGCTGAGGTGCTTGTAGCATTGGAGTATCTGCACATGTTAGGAATAATTTACAGAGATCTAAAACCGGAAAACGTGTTAGTCAGATCAGACGGTCACATCATGCTCTCTGATTTTGATCTATCTCTTTGCTCCCACGCAATCCCAGCCGTTGAGTTATCACCAGACGATCCACCACTGGATGTATCCTGCACCCGTCCGCATTCCATTTCTTCTCCTTTCAAGTGTCTCTCGAAGCGACTTTTCCGGTCCAGAAAGGTTCAAACATTTCAATCAAACCGGCTTTTTGTCGCTGAACCCGTTGAAGCACGGTCTTGTTCGTTCGTCGGAACACACGAGTACGTTTCACCGGAAGTAGCTTCCGGAAACTCTCACGGCAACGCTGTGGACTGGTGGTCGTTTGGGATATTCATCTACGAGATGGTGTACGGAAGAACACCGTTTGCGGGCCCATCGAATGAAGCAACTTTGCGCAACATTATAAAAAAACCTCTTAGTTTTCCTACTGCTACGCCTTCCAGTACGCTTGAAATGCACGCGCGGGATCTTATTTCCGGTTTGCTTAATAAAGACCCGAACCGTAGACTCGGGTTGAAGCGGGGCGCTGCTGACGTTAAGATGCATCCGTTTTTTGTTGGGCTTAACTTGGCGTTGATACGGATGGTAACGCCGCCGGAGGTTCCTGGTTTAAGAAGGAACAAAACGACGCCGTTTGTCTCCGGGAAAGATAGTAACGGTAACCGAAGTTCCAGTAAACAGCACCCTGCTTCGTCGTTTGATTACTTTTAA	1371	0.4821	MLESGSDRDSGMSLETVNSNTQRTSLSSATESICSTSFSRLSFELLPSSSPESLSIKPHRSSDFAYSAIRKSGLTFRDFHLLRRIGSGDIGTVYLCRLRDSSVNYINDEDSSFYYAMKVVDKDAVALKKKSHRAEMERKILKMLDHPFLPSLYAEFEASNFSCIVMEFCSGGDLHSLRHRHPRNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVELSPDDPPLDVSCTRPHSISSPFKCLSKRLFRSRKVQTFQSNRLFVAEPVEARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLSFPTATPSSTLEMHARDLISGLLNKDPNRRLGLKRGAADVKMHPFFVGLNLALIRMVTPPEVPGLRRNKTTPFVSGKDSNGNRSSSKQHPASSFDYF*	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa1g4311	456	MobiDBLite	consensus disorder prediction	431	451	-	-
	Psa1g4311	456	ProSiteProfiles	Protein kinase domain profile.	79	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa1g4311	456	CDD	STKc_phototropin_like	77	422	-	-
	Psa1g4311	456	MobiDBLite	consensus disorder prediction	1	25	-	-
	Psa1g4311	456	Gene3D	Transferase(Phosphotransferase) domain 1	169	236	-	-
	Psa1g4311	456	Pfam	Protein kinase domain	79	236	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa1g4311	456	Pfam	Protein kinase domain	299	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa1g4311	456	SMART	serkin_6	79	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Psa1g4311	456	MobiDBLite	consensus disorder prediction	424	456	-	-
	Psa1g4311	456	Gene3D	Phosphorylase Kinase; domain 1	77	168	-	-
	Psa1g4311	456	PANTHER	FLIPPASE KINASE 1-RELATED	1	456	-	-
	Psa1g4311	456	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	210	222	IPR008271	GO:0004672\|GO:0006468
	Psa1g4311	456	PANTHER	SERINE/THREONINE KINASE FAMILY PROTEIN	1	456	-	-
	Psa1g4311	456	MobiDBLite	consensus disorder prediction	9	25	-	-
	Psa1g4311	456	Gene3D	Transferase(Phosphotransferase) domain 1	297	423	-	-
	Psa1g4311	456	SUPERFAMILY	Protein kinase-like (PK-like)	53	422	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa1g4311	Psa-Chr1	339945121	339947816	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa1g4311	7	456	AGC Kinase Gene Family	AT2G34650	65.721	0.0	579

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Psa1g4311		Pkinase	3.8e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa1g4311	-		-	gmx:100795536	678.322