Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4270 ATGTTTGTTTTTGGAAACTTGGTGGCGGCTCAAGTTGCGACAGAAATCGGTTGGAGCGAGTTTGCGATTTCAATGTTTTCACTAGGAATGGTACATTATTTGCAGGCCAGGACTGTTCAAGAAAACTATAAAAAGAAAGCTGCAATAAAGAAGATGGACATGAAAGCATCAAAAGAATTTTTTGCCGAGCTTAAGGTGTTAACGCGTGTTCATCACTTGAACTTGGTAAGGTTGATTGGATATTGCATTGAAGGTTGA 258 0.3915 MFVFGNLVAAQVATEIGWSEFAISMFSLGMVHYLQARTVQENYKKKAAIKKMDMKASKEFFAELKVLTRVHHLNLVRLIGYCIEG* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4270 85 Pfam Protein tyrosine and serine/threonine kinase 29 84 IPR001245 GO:0004672|GO:0006468
Psa1g4270 85 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 44 85 IPR044812 GO:0019199|GO:0045087
Psa1g4270 85 Gene3D Phosphorylase Kinase; domain 1 11 85 - -
Psa1g4270 85 SUPERFAMILY Protein kinase-like (PK-like) 42 84 IPR011009 -
Psa1g4270 85 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 44 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4270 Psa-Chr1 338494670 338496158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4270 21 85 Receptor kinase-like Gene Family AT3G21630 63.077 4.16e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa1g4270 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4270 - K13429 nnu:104594072 78.5666