Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4184 ATGATCTCTTCAATAAAGTACACACCATCATTACTCACCAACTCTACTTTCTCAAGCACAAAGCTTTTACTTCCAAGGTCTCAACTTTCAATTCAACCAACCATTCAAAATGTTGAACAAACCATGGCTCTCTCTTTACTTTCTTTCGAAAAACCTCTCTACCTTTCATCCACTAAGAATTTTGCATTGTTAAATAAACCCAAGAGAAAGAATGTGACAGAATGTCAAGCCTATGAGGCTGATAGATCAAGGCCATTAGAGATTAACATTGAACTTCCTGGTGAAGAAGCAGCTCAAAAGGTTAAAATTGGACTATATTTTGCTACTTGGTGGGCTTTGAATGTTGTTTTCAATATATACAACAAGAAGGTTTTGAATGCTTTTCCGTACCCTTGGCTTACTTCCACTTTGTCCTTAGCTGCTGGTTCTCTCATCATGTTAATCTCATGGGCCACTAGGGTTGCTGAGGCCCCAAAAGTTAATTTGGACTTCTGGAAAGCCCTTTTTCCGGTAGCTGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAAGTAGCAGTTTCATTCACTCACATCATCAAGAGTGGAGAACCAGCTTTCAGTGTGCTAGTATCAAGATTCTTGCTTGGAGAAGCATTTCCCATGCAAGTTTATCTTTCATTGTTACCAATAATTGGTGGTTGTGCACTAGCTGCAGTGACTGAGCTCAATTTCAACATGATCGGATTTATGGGAGCTATGATATCAAATTTGGCATTTGTATTCAGAAATATATTCTCCAAGAAAGGGATGAATGGGATGAGTGTTAGTGGAATGAACTATTATGCTTGTCTTTCAATGTTATCTTTATTAATTCTCACACCTTTCGCCATTGCTGTCGAGGGTCCTAAACTTTGGGCTGCTGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGTTGCACAGAGTGTGTTCTACCATTTGTACAATCAAGTCTCATACATGTCTCTTGATCAGATTTCTCCTTTGACATTTAGCATAGGGAACACAATGAAGAGAATTTCTGTAATAGTCTCTTCCATTCTTATCTTTCACACGCCACTTCAACCTATCAATGCTCTTGGAGCAGCAATTGCGATTCTTGGAACCTTCATCTATTCACAGGCTAAAGAGAAATAA 1188 0.3965 MISSIKYTPSLLTNSTFSSTKLLLPRSQLSIQPTIQNVEQTMALSLLSFEKPLYLSSTKNFALLNKPKRKNVTECQAYEADRSRPLEINIELPGEEAAQKVKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMLISWATRVAEAPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMQVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMNGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKLWAAGWQTAVSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPLQPINALGAAIAILGTFIYSQAKEK* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4184 395 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 29 393 - -
Psa1g4184 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 391 - -
Psa1g4184 395 Pfam Triose-phosphate Transporter family 102 390 IPR004853 -
Psa1g4184 395 PANTHER SOLUTE CARRIER FAMILY 35 29 393 - -
Psa1g4184 395 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
Psa1g4184 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4184 Psa-Chr1 334325954 334327914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4184 35 395 Antiporters AT1G61800 79.834 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4184 K15283 K05350 gmx:100804205 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4184 1 334325954 334327914 Psa1g4184 1 334325954 334327914 ECH