Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4183 ATGTCCAAAGTAGCAGTTTCATTCACTCACATCATCAAGGTGGAGACCAGCTTTCAGTGTGCTAGTACCAAGATTCTTGCTTGGGAAGCATTTTCCCATGCAAGTTTATCTTTCATTGTTACCATAATTGGTGGTTGTGCACTAGCTGCAGTGACTGAGCTCAATTTCAACATGACGATTTATGGAGGCTATGATATCAAATTTGCATTTGTATTCAGAATATATTCCCAAGAAAGGATGAATGGGATGAGTGTTAGTGGAATGAACTATTATGCTTGTCTTTCAATGTTATCTTATATTCTCACCACCTTTCGCCATTGCTGTCGAGGGTCTAAACTTTGGGCTGCTGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGGTATGGTGGGTAGTTGCACAGAGTGTGTTCTACCATTTGTACAATCAAGTTCAACATGTCTCTTGA 453 0.4062 MSKVAVSFTHIIKVETSFQCASTKILAWEAFSHASLSFIVTIIGGCALAAVTELNFNMTIYGGYDIKFAFVFRIYSQERMNGMSVSGMNYYACLSMLSYILTTFRHCCRGSKLWAAAGKQLCLRLVPILVWWVVAQSVFYHLYNQVQHVS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4183 150 Pfam Triose-phosphate Transporter family 1 147 IPR004853 -
Psa1g4183 150 PANTHER SOLUTE CARRIER FAMILY 35 1 150 - -
Psa1g4183 150 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4183 Psa-Chr1 334317616 334318939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4183 1 150 Antiporters AT1G61800 55.195 4.16e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4183 K15283 - tcc:18593591 152.14