Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4158 ATGAATTGCTTTTCATGCTGCAATTCAGGTGCTGAAACATCATCTTATAAAAAAGAACGTTCCAAATATGTTTCCAAAGGACGGAGAACATTCAAATCATTAGCAGCTGCTATGTCACTCAAATCAGGTAGTAGCAGACAGAGACAAATTACAGCGGAGATATTAAAATATGGAACCGCGCAAAATGATGTTAAAGTACTAACGTATGAAGAAGTCGCTGATGCGACAAACAACTTCAGTTCGGATTCTCTTATCGGAGAAGGTGGATTTGGGAATGTTTATAAAGGATACTTAAAGAGCATTGAACAGACGGTAGCTGTGAAGAAATTGAATAGGGATGGGGATCAAGGAACAAGAGAATTTTTCGCCGAAGTTTTGATGTTGAGTATGGTGAAACATCCAAACCTTGTGAGGCTGGTTGGTTATTGCGTAGAAGATGATCAAAGGATTTTGGTTTATGAGCATATGGCTAATGGAAGCTTGGAAAATCACCTTCTAGATATAGGCGATAAGGAACCGTTGGATTGGCAAACAAGGATGAAAATTGCTGATGGAGCCGCGAGAGGACTTGAGTACCTGCATAATTCTGCAGATCCGCCGATTATTTTCCGCGATTTTAAGTCGTCTAATATACTATTAGATGAAAATTTCAATCCAAAGCTTTCTGATTTCGGTCTTGCTAAGATTGCTCCAATAGAGGGTGAGGGCTTGGTCTCGACTCGGGTTATGGGGACTTATGGTTATTGTGCACCAGAGTATGCTGCTACCGGTAAATTATCCTCAAAATCAGACATCTATAGTTTTGGTGTTGTGTTTTTGGAAATTATCTCGGGTAGACGAGTTATTGACACTGCAAGATCTGCAGAAGAACAAAACTTAATTGATTGGGCACAACCTTTGTTTAAGGACCGAACAAAGTTCACACTAATGGCCGATCCTTTGCTTAAAGGCCAGTTTCCGGTGAAGGGACTATTTCAAGCTCTAGCAGTGGCAGCAATGTGTCTACAAGAAGAAGCCGATACGCGGCCTTATATGGACGATGTCATAACGGCTCTTACGCATCTAGCAGTACACAAGACTGATGAAAAAGACATAGCTGGTGAATCTCTAAAAAGTGCTGCTGAAACCAGGAATTCTACTTGTTGTGTTTCTTTGCTTCTTCCTCTTCCATGTTGTTGGCAAAAACCAGAAACTAGGCTTGGACATGGAAATGGTTCTATCAGAAACCATTTCCATGTCGACGAAGTGCTGCTGAGTGATCCAATGGTGCCTCTTGTGCCTATAGCAACAGGTGCAGCCATTTCAAATGGACTTGTGCCAATGAGTTATATGGCACTAGTCTTTATAGTGCATGAGTTTGATGTTAGAAAACTGAATGAGGCTTGTAACCAGAGCGAAGCGGAACAAGTTGAAGTTGATAACTTACCTGTCGGAGACGACGACGGAGACAACGGCGATGATAATAGGAACCTCAGCTCTGAATTTGAGATATAA 1494 0.4143 MNCFSCCNSGAETSSYKKERSKYVSKGRRTFKSLAAAMSLKSGSSRQRQITAEILKYGTAQNDVKVLTYEEVADATNNFSSDSLIGEGGFGNVYKGYLKSIEQTVAVKKLNRDGDQGTREFFAEVLMLSMVKHPNLVRLVGYCVEDDQRILVYEHMANGSLENHLLDIGDKEPLDWQTRMKIADGAARGLEYLHNSADPPIIFRDFKSSNILLDENFNPKLSDFGLAKIAPIEGEGLVSTRVMGTYGYCAPEYAATGKLSSKSDIYSFGVVFLEIISGRRVIDTARSAEEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEADTRPYMDDVITALTHLAVHKTDEKDIAGESLKSAAETRNSTCCVSLLLPLPCCWQKPETRLGHGNGSIRNHFHVDEVLLSDPMVPLVPIATGAAISNGLVPMSYMALVFIVHEFDVRKLNEACNQSEAEQVEVDNLPVGDDDGDNGDDNRNLSSEFEI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4158 497 Gene3D Transferase(Phosphotransferase) domain 1 156 380 - -
Psa1g4158 497 ProSiteProfiles Protein kinase domain profile. 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g4158 497 MobiDBLite consensus disorder prediction 469 497 - -
Psa1g4158 497 MobiDBLite consensus disorder prediction 482 497 - -
Psa1g4158 497 PANTHER OS07G0668900 PROTEIN 1 378 - -
Psa1g4158 497 Gene3D Phosphorylase Kinase; domain 1 39 155 - -
Psa1g4158 497 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Psa1g4158 497 CDD STKc_IRAK 85 355 - -
Psa1g4158 497 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 378 - -
Psa1g4158 497 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Psa1g4158 497 Pfam Protein kinase domain 81 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4158 Psa-Chr1 333221799 333227669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4158 1 357 Glycoside Hydrolase AT3G07070 53.631 2.23e-133 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Psa1g4158 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4158 - - gmx:100305361 600.897