Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4111 ATGGCTGAGCCTGCACAATCTAATGCGGAGCTGTTGGAATGGCCGAAAAAAGATAACCACCGCTTCCTGCATGTTGTTTACCGAGTTGGTGATCTTGATCGCACCATCAAGTTTTATACCGAAGCTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATATACTAATGCTTTTCTTGGATTTGGTCCTGAACAATCTAATTTTGTTGTGGAGTTAACTTATAATTATGGGGTGACCTCGTACGATATTGGAACTGGCTTTGGACATTTTGCTCTCGCAACACCAGATGTCTACAAATTTGTTGAAAATGTCCGAGATAAGGGTGGAATCGTCGCTAGGGAGCCTACTCCAGTTGGTGATACTGTTAATGCCTTTGTGAAGGATCCTAATGGTTATGTTTTTGAAATTCTCCAAAAAGCTTCAACCCCTGAGCCGTTATGCCATATAATGTTTCGTGTTGGTGACTTAGACCGCACAATAAAGTTCTATGAAAAGGCTTTGGGTTTTAAGCTGGTGCAGAAGTTTGATATACCTCAAAACAAGATCACTTTAGCTATAATTGGTTATGGCGAAGAGCCCGAGAGAGTTGTGTTGGAGTTATTATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGAACCGATGATGTATACAAGAGCGCTGAGGTAGTCAAGATAGTCACTCAAGAGCTTGGAGGGAAGATTACCAGGCAACCAGGGCCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGATCCTGATGGATGGAAAATAGTGTTGGTCGATAATCAAGATTTTATGAAGGAGCTGGAATGA 858 0.4126 MAEPAQSNAELLEWPKKDNHRFLHVVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYTNAFLGFGPEQSNFVVELTYNYGVTSYDIGTGFGHFALATPDVYKFVENVRDKGGIVAREPTPVGDTVNAFVKDPNGYVFEILQKASTPEPLCHIMFRVGDLDRTIKFYEKALGFKLVQKFDIPQNKITLAIIGYGEEPERVVLELLYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVKIVTQELGGKITRQPGPIPGLNTKITSFLDPDGWKIVLVDNQDFMKELE* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4111 285 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 285 - -
Psa1g4111 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 150 277 IPR029068 -
Psa1g4111 285 Gene3D - 146 285 IPR029068 -
Psa1g4111 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 143 IPR037523 -
Psa1g4111 285 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Psa1g4111 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 145 IPR029068 -
Psa1g4111 285 ProSitePatterns Glyoxalase I signature 1. 152 173 IPR018146 GO:0004462|GO:0046872
Psa1g4111 285 TIGRFAM glyox_I: lactoylglutathione lyase 150 282 IPR004361 GO:0004462|GO:0046872
Psa1g4111 285 TIGRFAM glyox_I: lactoylglutathione lyase 8 151 IPR004361 GO:0004462|GO:0046872
Psa1g4111 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 149 277 IPR037523 -
Psa1g4111 285 PANTHER LACTOYLGLUTATHIONE LYASE 11 285 - -
Psa1g4111 285 Gene3D - 1 145 IPR029068 -
Psa1g4111 285 ProSitePatterns Glyoxalase I signature 1. 24 45 IPR018146 GO:0004462|GO:0046872
Psa1g4111 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 272 IPR004360 -
Psa1g4111 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 140 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4111 Psa-Chr1 331100786 331103267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4111 152 276 Calmodulin-binding Proteins AT1G08110 27.333 1.27e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4111 K01759 - gmx:100799447 482.641