Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa1g4109 | ATGGCTGCGGCTGCACAATCGAATGCTGAGCTGTTGGAATGGCCTAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTTTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTATACTGAAGCTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTTCCGGAAGAGAAATATGCCAATGCTTTTCTTGGATTTGGCTCTGAAAAAACTAATTTTGTTGTGGAATTAACTTATAATTATGGAGTGACCTCTTATGATATTGGAACTGGCTTTGGACATTTTGCTATCGCAACTCCAGATGTCTACAAATTTGTTGAAGACGTCCGGGCTAAGGGTGGAAACGTCACTAGGGAGCCTGGTCCAGTTAGTGGTGGGTCAACTGTTATTGCCTTTGTGAAGGATCCTGATGGTTATATTTTTGAAATTCTCGAAAGAGCTTCAACCCCTGAGCCATTATGCCAAGTAATGCTTCGTGTTGGTGACTTGGACCGTTCAATTAAGTTTTATGAAAAGACTTTGGGTTTGAAGGTGGTGAAGAAGGTTGATAGACCTGAGTACAAGTACACTTTAGCTATGCTTGGGTATGCAGAGGAGGACAAGACAGTTGTGTTGGAGCTGACATATAACTATGGTGTTACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGCACTGATGATGTATATAAGAGTGCTGAGGTAGTCAACATAGTCTCTCAAGAGCTTGGAGGGAAGATTGCCAGGCAACCAGGGCCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGATCCTGATGGATGGAAAACAGATTTGGCCAGGCGAAAATCATTGCTCCATGTTTTATTTCAATAG | 867 | 0.4245 | MAAAAQSNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYANAFLGFGSEKTNFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVSGGSTVIAFVKDPDGYIFEILERASTPEPLCQVMLRVGDLDRSIKFYEKTLGLKVVKKVDRPEYKYTLAMLGYAEEDKTVVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNIVSQELGGKIARQPGPIPGLNTKITSFLDPDGWKTDLARRKSLLHVLFQ* | 289 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa1g4109 | 288 | ProSitePatterns | Glyoxalase I signature 2. | 88 | 100 | IPR018146 | GO:0004462|GO:0046872 | |
| Psa1g4109 | 288 | Gene3D | - | 148 | 284 | IPR029068 | - | |
| Psa1g4109 | 288 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 152 | 276 | IPR029068 | - | |
| Psa1g4109 | 288 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 151 | 279 | IPR037523 | - | |
| Psa1g4109 | 288 | PANTHER | LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN | 11 | 283 | - | - | |
| Psa1g4109 | 288 | Gene3D | - | 1 | 147 | IPR029068 | - | |
| Psa1g4109 | 288 | ProSitePatterns | Glyoxalase I signature 1. | 154 | 175 | IPR018146 | GO:0004462|GO:0046872 | |
| Psa1g4109 | 288 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 21 | 145 | IPR037523 | - | |
| Psa1g4109 | 288 | PANTHER | LACTOYLGLUTATHIONE LYASE | 11 | 283 | - | - | |
| Psa1g4109 | 288 | TIGRFAM | glyox_I: lactoylglutathione lyase | 7 | 154 | IPR004361 | GO:0004462|GO:0046872 | |
| Psa1g4109 | 288 | TIGRFAM | glyox_I: lactoylglutathione lyase | 152 | 282 | IPR004361 | GO:0004462|GO:0046872 | |
| Psa1g4109 | 288 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 23 | 142 | IPR004360 | - | |
| Psa1g4109 | 288 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 154 | 273 | IPR004360 | - | |
| Psa1g4109 | 288 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 20 | 147 | IPR029068 | - | |
| Psa1g4109 | 288 | CDD | GlxI_Ni | 23 | 143 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa1g4109 | Psa-Chr1 | 331031984 | 331037444 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa1g4109 | 154 | 282 | Calmodulin-binding Proteins | AT1G08110 | 28.571 | 3.72e-12 | 63.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa1g4109 | K01759 | - | gmx:100794901 | 514.612 |