Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4104 ATGAAAGGTAGTGAAACTCAAATCTCTCTCAAACAACCTTCATCCCAAACCATGTCTTCATCTTCATCCTCTCTTATCAGCGGTGTTGTTGATAATAATAACTCTTCAAACCCGTCTGAGATGAGTATAAAAGCACCTATGGTAAGACCTTATAGTCGATCGAAAATGCCTCGACTTCGTTGGACACGATGTCTTCACCGTTGCTTTCTGCATGCAGTTCAAAAGCTTGAAAGAGAAGAAAGAGGGACTACACCAAAGTTAATTTTACAACTAATGAATGTTAAGGGACTTACTATATCTCATGTGAAAAGCCACCTTCAGATGTACAGGAGCATGAAACATGAGGCAATGAGTCAAGAAGCAAAGAAGAATATTATGGCAGCAAATTTATTAGCTTCCAGAATGATCTCATCCTCTGCTGTTGTTCCAAGATTCCTCCAAACTCCTGAGAATGGTTATGAGCCAGAGTCTTCAAATGGAAATCAAGGTAATAAATCGGTTGTAATTTGTAACAGCGATGAACGGAAGAAGCACACTTACATCATCTTCGACGGAGTTTTCAGCACTGTCCATGCAAATAAAAGGGACCAACAAGGATTCAAAGAAATAACCGCTAGAGGAAAGGAAATGAAGGAAAAAGAGACAGATGATTTGTCTCTTGAGCTCACTCTCACTTAA 678 0.3938 MKGSETQISLKQPSSQTMSSSSSSLISGVVDNNNSSNPSEMSIKAPMVRPYSRSKMPRLRWTRCLHRCFLHAVQKLEREERGTTPKLILQLMNVKGLTISHVKSHLQMYRSMKHEAMSQEAKKNIMAANLLASRMISSSAVVPRFLQTPENGYEPESSNGNQGNKSVVICNSDERKKHTYIIFDGVFSTVHANKRDQQGFKEITARGKEMKEKETDDLSLELTLT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4104 225 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 20 171 - -
Psa1g4104 225 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 20 171 IPR044848 GO:0003700
Psa1g4104 225 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 112 IPR006447 GO:0003677
Psa1g4104 225 MobiDBLite consensus disorder prediction 1 26 - -
Psa1g4104 225 Gene3D - 52 115 - -
Psa1g4104 225 SUPERFAMILY Homeodomain-like 55 112 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4104 Psa-Chr1 330699011 330701374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g4104 48 141 G2-like Transcription Factor Family AT2G42660 50.000 5.40e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa1g4104 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4104 - - cam:101502381 191.045