Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3992 ATGAGTTCAGTGCTAGCACTGGAAGAGTCGCTTGACGTTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTGCAAAAGAGGAGATGGAAATAATCAAGAGTTATAAAGGGGAAAAGGAGAAGTTAGGGAAATGTGAACAGTTCTTCATGGAGTTAATGAAAGTACCAGGGGTAGAATCTAAGCTCAGAGTATTTTCATTCAAGATTCAGTTCCATTATCAGGTTTCCGATCTTAAGAATAGCTTGAATGCTGTGAATGCTGCTTCAGAAGAGATCAGGAGTTTTGTCAAATTAAAGAGAATTATGCAAACAATACTTACTCTAGGAAATGCTTTGAACCAAGGAACTGCCAGGGGTTCTGCCATTGGATTCAGATTAGATAGCCTTCTTAAACTGACTGAGACACGTGCACGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGTTAGATGACAAATTGCCTGAAGTTTTAGACTTCTCTAAGGATCTTGCTAATCTAGAGCCAACGGCAAAGATCCAATTGAAGTTCCTGGCAGAGGAGATGCAAACTATAAACAAGGATTAG 573 0.3927 MSSVLALEESLDVDQVENLIKFCPAKEEMEIIKSYKGEKEKLGKCEQFFMELMKVPGVESKLRVFSFKIQFHYQVSDLKNSLNAVNAASEEIRSFVKLKRIMQTILTLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLDDKLPEVLDFSKDLANLEPTAKIQLKFLAEEMQTINKD* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3992 190 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 190 IPR015425 -
Psa1g3992 190 Gene3D Formin, FH2 domain 1 190 IPR042201 -
Psa1g3992 190 PANTHER FORMIN-J 1 189 - -
Psa1g3992 190 SUPERFAMILY Formin homology 2 domain (FH2 domain) 9 189 - -
Psa1g3992 190 Pfam Formin Homology 2 Domain 4 189 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3992 Psa-Chr1 325866599 325867171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3992 1 189 FH2 protein (formin) Gene Family AT3G32400 70.526 8.19e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3992 - - cam:101513310 332.413