Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3935 ATGAGTGAACAATTGGGGGTGCTAAAAGTCATAGTTGTGCAAGGAAGAAGGTTGGTGATTAGGGATTTCAAGACAAGTGATCCTTATGTTGTTCTCAAACTAGGGAATCAGACTGCAAAGACCAAGGTCATTAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCATTCTGACAGAACCCTTGGGAGTTCTCAATTTGGAAGTATTTGATAAAGATCTTTTGAAAGCTGATGACAAGATGGGAAATGCATTTATCAACCTTCAACCATTAGTCTCTGCAGCAAGATTAAGAGATATTTTAAAAGTCTCTTCTGGCGAGACAACATTACGAAAGGTGATACCTGATACTGATAACTGTCTTGTACGCGAAAGCAGTATCAATTGCGTTAATGGCGCGGTTGTGCAGAATGTTTGGTTAAGGCTTCGTGAAGTTGAATCCGGGGAACTAGAATTGACACTCAAGTTGACCAAACCTGTTGCAACTTCAAAATAG 501 0.3972 MSEQLGVLKVIVVQGRRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFILTEPLGVLNLEVFDKDLLKADDKMGNAFINLQPLVSAARLRDILKVSSGETTLRKVIPDTDNCLVRESSINCVNGAVVQNVWLRLREVESGELELTLKLTKPVATSK* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3935 166 Gene3D C2 domain 3 164 IPR035892 -
Psa1g3935 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Psa1g3935 166 SMART C2_3c 7 102 IPR000008 -
Psa1g3935 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
Psa1g3935 166 PRINTS C2 domain signature 22 34 IPR000008 -
Psa1g3935 166 PRINTS C2 domain signature 46 59 IPR000008 -
Psa1g3935 166 PRINTS C2 domain signature 67 75 IPR000008 -
Psa1g3935 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 163 - -
Psa1g3935 166 CDD C2_ArfGAP 5 150 - -
Psa1g3935 166 Pfam C2 domain 7 99 IPR000008 -
Psa1g3935 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3935 Psa-Chr1 323387154 323389395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3935 1 157 C2H2 Transcription Factor Family AT4G21160 44.586 2.01e-38 132