Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3932 ATGGGGATTGTTTCACAGGATGCCCTTAACCAACTCCAGGCTCTTGTAGATCAAGTTGAGGAGCCACTTCAGAAAACGTTTCAGAATGTTCATCAAGGACATGTAATCGAAACCTTGATTCGGTTTCTAAAAGCAAGGGAATGGAATGCTTCAAAGGCTCATAAAATGTTGATTGAGAGTTTGAACTGGAGAGTGCAAAATGAGATTGACAAAATATTATCGAAACCAATAATCCCTCCAGATTTGTATAGAGGTGTGCGCGATTCTCAGCTCATAGGATTGTCAGGGTACTCACGAGAGGGTCTTCCTGTCTTTGCAATCGGTGTTGGACTTAGCACATTCGACAAAGCATCTGTCCATTATTATGTTCAGTCTCACATTCAAATTAATGAATATCGGGATCGTGTAGTCTTGCCTTCTGCGTCGAAGAAGCATGAGCGCCCTATTACTACATGCGTAAAGGTTTTGGATATGACCGGTCTGAAGCTATCAGCTCTGAATCAGATTAAGCTGTTAACCATAATTTCATCCATTGATGATCTGAACTACCCCGAGAAGACAAATACTTATTACATTGTAAACGCACCGTACATATTTTCAGGTTGTTGGAAGGTTGTGAAGCCGCTTTTACAAGAGAGGACTAGAAAAAAAGTGCAAGTCTTACAAGGTTGTGGGCGAGATGAGCTGTTGAAGATCATGGATTATGCATCTCTACCGCATTTCTGTAGAAAAGAAGGCTCGGGATCATCGAAACATTCAGGAAGTGGGAGTGAAAATTGTTATTCCTTGGATCATCCCTTCCATCAAGAACTCTACAACTACATCAAGGAACAATCAAGAATCGAAGCTAGGGGACCAATGAAGCAGGGATCTTTTCATGTAGAATTTCCGGAACCTGCTGCTGAGGAAGAAGCAGATATTGCCAAGACTATAGAGTCAGAGATACACAAGTTTGAGAACAATCTTGAGATTGTTGATTGA 981 0.4128 MGIVSQDALNQLQALVDQVEEPLQKTFQNVHQGHVIETLIRFLKAREWNASKAHKMLIESLNWRVQNEIDKILSKPIIPPDLYRGVRDSQLIGLSGYSREGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRVVLPSASKKHERPITTCVKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYIVNAPYIFSGCWKVVKPLLQERTRKKVQVLQGCGRDELLKIMDYASLPHFCRKEGSGSSKHSGSGSENCYSLDHPFHQELYNYIKEQSRIEARGPMKQGSFHVEFPEPAAEEEADIAKTIESEIHKFENNLEIVD* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3932 326 PANTHER OS09G0258000 PROTEIN 1 322 - -
Psa1g3932 326 PANTHER - 1 322 - -
Psa1g3932 326 SUPERFAMILY CRAL/TRIO N-terminal domain 13 76 IPR036273 -
Psa1g3932 326 SMART sec14_4 79 247 IPR001251 -
Psa1g3932 326 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 79 239 IPR001251 -
Psa1g3932 326 Pfam CRAL/TRIO domain 90 241 IPR001251 -
Psa1g3932 326 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Psa1g3932 326 Gene3D - 4 288 IPR036865 -
Psa1g3932 326 CDD SEC14 83 241 IPR001251 -
Psa1g3932 326 SUPERFAMILY CRAL/TRIO domain 81 278 IPR036865 -
Psa1g3932 326 Pfam CRAL/TRIO, N-terminal domain 8 58 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3932 Psa-Chr1 323330278 323333716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3932 1 320 Acyl Lipid Metabolism Gene Families AT5G47730 75.701 2.13e-180 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3932 - - gmx:100793867 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0745 4 45997930 46001069 Psa1g3932 1 323330278 323333716 PCT