Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3928 AAACCCTTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATATTTGGTACCTTTCTTGCTTCAGTTGTGACGGGTGTCTTGGTTTATGTTGGTGGGTTGGTCTTCCTTATGTATAGACTACCTTTTGTTGAGTGCCTGATGTTTGGCGCCCTTATATCAGCAACCGATCCTGTTACGGTTTTGTCCATATTTCAGGAGCTGGGCACTGATGTCAATCTATATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAGTACCGAAACTTCTGGATATCTTATGCTTATCTGAAATGGCCCAAGTATCATTGAAGTTCACTTTTAACCCAAGTACTTATTTCACAGGACAATGTCATTGGTTAGAAAAAATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTATGTCTGCAGCCTTCAGAATTTGGAGAGCTGTCTTTTTGTTCTCTTCCCATATTTCTCGTAAGCAATCTTTACGGACCATTTCTTGATAGCCGTTTCACCAGGTACATGCTGGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCAATATTATTCACAGGAATTGTGATGAAGCACTATGCGTTTTCAAATTTGTCACGAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATATATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTCATTGTAGTTGCAAGAGCCGCAAATGTCTTTTCTTGTGCTTACCTGGTCAATCTTGTCAGACCTGCACATCAACAGATACCTTCAAAATACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATTTTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTAGGTGGTGAAGATCACAGTGATAGCTCTTTGGCTTCAGTTGGTCCCATCACAAATTACGAGGAGGAGAATGGTTATATTGCTCCATCATATGATGATGAATCATCGTCATCTGGGAACAAAATAAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACGGCTTTAGATAGAAACTATCTTACCCCATTCTTTACAAGCAATAATGGAGACGAAGATGAAGAAGCCCAGCCTTTTACTTCCAGAAGATCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCATATTCATCACCATCACCGTGA 1371 0.3982 KPFFSNFGAIVTFAIFGTFLASVVTGVLVYVGGLVFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAVPKLLDILCLSEMAQVSLKFTFNPSTYFTGQCHWLEKIHLDKISSWWLLDFWRLLLGLCLQPSEFGELSFCSLPIFLVSNLYGPFLDSRFTRYMLAEGLGLSGIVSILFTGIVMKHYAFSNLSRSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIVVARAANVFSCAYLVNLVRPAHQQIPSKYQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGEDHSDSSLASVGPITNYEEENGYIAPSYDDESSSSGNKIKMKLKEFHKSAASFTALDRNYLTPFFTSNNGDEDEEAQPFTSRRSFTSSRSGFHGQSPYSSPSP* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3928 456 MobiDBLite consensus disorder prediction 419 456 - -
Psa1g3928 456 PANTHER SODIUM/HYDROGEN EXCHANGER 6 1 429 - -
Psa1g3928 456 PANTHER SODIUM/HYDROGEN EXCHANGER 1 429 IPR018422 GO:0006812|GO:0015299|GO:0016021
Psa1g3928 456 Gene3D - 43 92 - -
Psa1g3928 456 Pfam Sodium/hydrogen exchanger family 177 346 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa1g3928 456 Pfam Sodium/hydrogen exchanger family 2 89 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3928 1 431 Antiporters AT5G55470 26.866 2.08e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3928 K14724 - gmx:100790830 561.992