Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3866 ATGCTATCTCTCAATGTTTTTCCATCTTCTTCCTCCATCCCTTTCACAAAACCAAATCACCATTTTTCCATCAATGCACCTCACACTCTCAAACCAAATCTCCTCAACAGGTTTCACCATGAATCACATCTCAAGAAAACCAATCTTTCTCCCACACCCACATCTCAGATCCACCGTTCAACCACAAAGTTAGCATCTTTTAACGGATTCTTCTCATACCCATTTGAGTTTTCACCGTTTTCGCCAAAACCCAGAAACCAGATTCTGAAAGCTGTATCTGATGAAGGTGAAGTTTCACCTCCAAGCACTACTCCCAAACCTAAAAATCTCAAGAAACTCGCTTTGGTGTTTGGGTTTTGGTACTTTCAAAACATTGTTTTCAACATCTACAACAAGAAAGTGTTGAACATTTTCTCTTTCCCATGGCTTCTTGCTTCTTTTCAGCTCTTTGTTGGTTCAATCTGGATGCTTGTTCTTTGGTCTTTAAAGCTTCAACCTTGTCCAAAAATCTCAAAACCTTTCATTTTTGCACTTCTTGGACCTGCTTTGTTTCACACAATAGGTCACATTTCAGCCTGTGTTTCATTCTCTAAGGTTGCTGTTTCTTTCACACATGTTATCAAGTCAGCAGAACCTGTTTTCTCTGTGATATTCTCTTCTGTTCTAGGTGATAGGTATCCAATTCAGGTTTGGCTTTCAATTTTACCTATTGTTCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTTTCTTTCAACATTCAAGGACTGTGGTGTGCTCTTATCAGCAATGTTGGTTTTGTGTTGAGAAACATTTATTCGAAAAAGAGTTTACAGAATTTCAAAGAAGTTGATGGATTGAACTTGTATGGTTGGATTACTATACTTTCGTTTTTGTATCTTTTCCCGGTCGCGATTTTCGTAGAAGGGTCTCAATGGATTCCGGGGTATTACAAAGCAATTGAAGCTATTGGAAAGCCTTCAATTTTGTATGTTTGGGTTTTGGTTTCTGGTGTTTTCTATCATCTTTATAATCAATCATCTTACCAAGCATTGGATGAGATTAGTCCATTAACTTTCTCGGTCGGAAATACAATGAAGAGAGTGGTGGTTATCGTGTCTTCGGTTTTGGTGTTCAGGAATCCGGTTCGGCCGCTTAATGGCCTTGGATCTGCCATTGCGATTCTCGGGACTTTTCTGTACTCGCAAGCTACCGCTGCTAAGAAAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1257 0.3922 MLSLNVFPSSSSIPFTKPNHHFSINAPHTLKPNLLNRFHHESHLKKTNLSPTPTSQIHRSTTKLASFNGFFSYPFEFSPFSPKPRNQILKAVSDEGEVSPPSTTPKPKNLKKLALVFGFWYFQNIVFNIYNKKVLNIFSFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIFALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNIQGLWCALISNVGFVLRNIYSKKSLQNFKEVDGLNLYGWITILSFLYLFPVAIFVEGSQWIPGYYKAIEAIGKPSILYVWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATAAKKAKKIEGEKSS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3866 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 401 - -
Psa1g3866 418 Pfam Triose-phosphate Transporter family 112 401 IPR004853 -
Psa1g3866 418 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 48 414 - -
Psa1g3866 418 PANTHER SOLUTE CARRIER FAMILY 35 48 414 - -
Psa1g3866 418 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 113 411 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3866 Psa-Chr1 320478958 320480847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3866 1 416 Antiporters AT5G17630 67.299 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3866 K15283 - gmx:100779531 652.899