Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3850 ATGAACTTCTGTCTTCTCATAGCAATAGCTCTTTGCTTTGTTGCGGTTGTGTTAAGAGGACTACCAGTACCATCATCCTTCTCCTCAAAACCACAGCTTGATCCATTGTTTTACAGTAAAACATGTCCTCAATTGCCTTTTATTGTATATCAAATTTTATGGAATGTTTCTAAGACGGATCACCGAATGCCTGCGAGTCTCATAAGACTTCACTTTCATGATTGTTTTGTTCAAACTCGAGGTCCATGTTGGATTGTGTCATTGGGAAGAAGGGATAGTTTAACAGCAAATCAAGCTCTTGCTAATCAAAATCTTCCATCTCCTTCCTTCAATCTAACTCAACTTAAATCTTCTTTTGCTGTACAAGGCCTCAACACCAATGATCTAGTAGCACTCTCAGGTGCTCATACATTTGGAAGAGCACGTTGTTCATTATTTGTCGATCGATTATACAACTTCAACAATACTGGCAAACCTGATCCAACTCTTGATACAGCATACTTGAAAGAATTGCAGAAAGAATGTCCTAAGAATGGACCTGGAACAAACCGTGTGAATTTCGATCCTACGACTCCTGATATATTGGACAAGAACTACTACAGCAATCTTCAAGTTAAAAAGGGTTTGCTTCAAAGTGACCAAACGTTGTTCTCAACACCAGGTGCAGATACCATTAGCATTGTGAACAAATTTGGAAATAACCAAAATGCTTTCTTTGAGAGTTTTAGGAATTCAATGATTAAAATGGGAAATATTGGCGTGCTTACGGGAAAGAAAGGAGAAATTAGAAAACAATGCAATTTTGTTAACAAGAAATCTTCTGAATTGGATCTTGCCACTGTGAGATCCAGAGAATCGGTAGAGGAGGATTTAGTTAGTTCAATCTAA 888 0.3773 MNFCLLIAIALCFVAVVLRGLPVPSSFSSKPQLDPLFYSKTCPQLPFIVYQILWNVSKTDHRMPASLIRLHFHDCFVQTRGPCWIVSLGRRDSLTANQALANQNLPSPSFNLTQLKSSFAVQGLNTNDLVALSGAHTFGRARCSLFVDRLYNFNNTGKPDPTLDTAYLKELQKECPKNGPGTNRVNFDPTTPDILDKNYYSNLQVKKGLLQSDQTLFSTPGADTISIVNKFGNNQNAFFESFRNSMIKMGNIGVLTGKKGEIRKQCNFVNKKSSELDLATVRSRESVEEDLVSSI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3850 295 Gene3D - 33 79 - -
Psa1g3850 295 ProSitePatterns Peroxidases proximal heme-ligand signature. 128 138 IPR019793 -
Psa1g3850 295 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PANTHER PEROXIDASE FAMILY PROTEIN 77 280 - -
Psa1g3850 295 PANTHER PEROXIDASE FAMILY PROTEIN 7 78 - -
Psa1g3850 295 PANTHER PEROXIDASE 72-RELATED 77 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PANTHER PEROXIDASE 72-RELATED 7 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 Gene3D Peroxidase, domain 2 106 249 - -
Psa1g3850 295 Pfam Peroxidase 79 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 SUPERFAMILY Heme-dependent peroxidases 32 270 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 Gene3D - 80 270 - -
Psa1g3850 295 ProSiteProfiles Plant heme peroxidase family profile. 65 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3850 295 CDD secretory_peroxidase 32 269 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3850 Psa-Chr1 319259310 319260780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3850 14 78 Peroxidase AT2G38380 41.538 3.79e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3850 K00430 - gmx:100804765 327.405