Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3841 GAATTATCATCTACACTGTCTCAAGGTCCTGATTGGAAAGTTCCATTAGGAAGAAGAGATGGTTTAACAGCGAATCAATCACTTGCTAATCAAAATCTTCCAGCTCCTTTCAACTCATTAGATCAACTTAAAGCTGCATTTGCCAAACAAGGCCTTAATACTACTGATCTAGTTGCTCTCTCCGGTGCTCATACATTTGGAAGAGCTCATTGCTCTTTATTTGTTAGTAGATTATACAACTTTAGCAATACTGGAAATCCTGATCCAACTGTTAACACAACTTACTTACAAGAATTGCGCAATATATGTCCCAATGGTGGATCGGGGACGAACCTCGCTAATTTCGATCCGACGACTGCGGATAAGTTTGATAAGAACTATTACTCTAATCTTCAAGTTAAAAAGGGTTTGCTTCAAAGTGATCAGGAGTTGTTCTCAACAAGTGGTGCAGATACTATTAGCATTGTCAACAAGTTCAGTGCTGATCAAAATGCTTTCTTTGAGAGCTTTAAGGCTGCAATGATTAAGATGGGTAATATTGGTGTGTTGACTGGGAAACAAGGAGAGATTAGAAAACAATGCAACTTTGTTAATTCAAAATCTGCAGAACTTGGTCTAATCAGTGTGGCTTCTACAGATTCATCAGAGGAGGGTATGGTTAGCTCGATGTAA 672 0.3854 ELSSTLSQGPDWKVPLGRRDGLTANQSLANQNLPAPFNSLDQLKAAFAKQGLNTTDLVALSGAHTFGRAHCSLFVSRLYNFSNTGNPDPTVNTTYLQELRNICPNGGSGTNLANFDPTTADKFDKNYYSNLQVKKGLLQSDQELFSTSGADTISIVNKFSADQNAFFESFKAAMIKMGNIGVLTGKQGEIRKQCNFVNSKSAELGLISVASTDSSEEGMVSSM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3841 223 Gene3D Peroxidase, domain 2 34 177 - -
Psa1g3841 223 SUPERFAMILY Heme-dependent peroxidases 4 198 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PANTHER PEROXIDASE FAMILY PROTEIN 1 208 - -
Psa1g3841 223 Pfam Peroxidase 3 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Haem peroxidase superfamily signature 8 20 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Haem peroxidase superfamily signature 56 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 Gene3D - 3 198 - -
Psa1g3841 223 PANTHER PEROXIDASE 72-RELATED 1 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 CDD secretory_peroxidase 3 197 IPR033905 GO:0004601|GO:0042744
Psa1g3841 223 ProSitePatterns Peroxidases proximal heme-ligand signature. 56 66 IPR019793 -
Psa1g3841 223 ProSiteProfiles Plant heme peroxidase family profile. 1 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Plant peroxidase signature 8 23 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Plant peroxidase signature 55 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Plant peroxidase signature 130 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3841 223 PRINTS Plant peroxidase signature 172 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3841 Psa-Chr1 318888713 318890089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3841 1 223 Peroxidase AT2G38380 56.696 3.04e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3841 K00430 - gmx:112997600 347.436