Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3835 ATGAACCCTTCTCTTCATCTAACAGTCACAGCTTTGTGCTGTCTAGTTGTTGTGCTTGGAGGGTTACCCTTCTCTTCAGATGCACAGCTTGATCCTTCCTTCTACAAAACCTCTTGTCCAAATGTTCATTCCATTGTTCGCGAAGTTCTAAGGAACGTTTCCAAGACGGATCCTCGTATTCTTGCCAGTTTCATCAGGCTTCACTTTCATGATTGCTTTGTTCAATATAACAATTTTTTTATTTTCTATTTGTATATGCTAATCAATAATACTTACAAGGCTAACGGTCCTGATTGGAAAGTTCCATTGGGAAGAAGAGATAGTTTAACAGCAAATCAATCACTTGCTAATGCAAATCTTCCTGGCCCCTCTTCCAACCTTACTACACTAAAATCCTTCTTTTCCCGTCAAGGCCTCAACACTACTGATCTAGTTGCACTCTCAGGCGCTCATACGATCGGTAGAGGTCAATGCCAATTCTTCGTTAATCGATTATACAATTTCAGCAACACTGGAAATCCCGATCCAACTCTCAACACGACGTACTTGCAAACATTGCAAGCATTATGTCCCAATGGTGGACCGGGTACCACCCTCGCCAATTTGGACTTAACCACTCCCAATACATTCGACTCAAAGTACTACTCCAATCTTCAAGTTCAAAAGGGTTTGTTTCAGAGTGATCAAGAGTTGTTTTCGACAAGCGGATCAGACACCGTCGCCATTGTCAATAGCTTCAACAACAATCAAACTCTTTTCTTTGAAAAGTTTAAGGCCTCAATGATTAAAATGGGTAATATTGGAGTGTTGACTGGAGCTCAAGGTGAAATTAGAAAACAATGCAACTTTGTTAATGGGGCTTCTGTTGGACTTGATTCAATGGTCACTAGAGAATCTTCACAAGATGGTGTTAGCTCATACTAA 924 0.4058 MNPSLHLTVTALCCLVVVLGGLPFSSDAQLDPSFYKTSCPNVHSIVREVLRNVSKTDPRILASFIRLHFHDCFVQYNNFFIFYLYMLINNTYKANGPDWKVPLGRRDSLTANQSLANANLPGPSSNLTTLKSFFSRQGLNTTDLVALSGAHTIGRGQCQFFVNRLYNFSNTGNPDPTLNTTYLQTLQALCPNGGPGTTLANLDLTTPNTFDSKYYSNLQVQKGLFQSDQELFSTSGSDTVAIVNSFNNNQTLFFEKFKASMIKMGNIGVLTGAQGEIRKQCNFVNGASVGLDSMVTRESSQDGVSSY* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3835 307 ProSitePatterns Peroxidases proximal heme-ligand signature. 143 153 IPR019793 -
Psa1g3835 307 SUPERFAMILY Heme-dependent peroxidases 29 285 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PANTHER PEROXIDASE 72-RELATED 92 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PANTHER PEROXIDASE 72-RELATED 8 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 ProSiteProfiles Plant heme peroxidase family profile. 29 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 Pfam Peroxidase 93 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PRINTS Plant peroxidase signature 259 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PANTHER PEROXIDASE 8 75 - -
Psa1g3835 307 PANTHER PEROXIDASE 92 293 - -
Psa1g3835 307 Gene3D - 30 89 - -
Psa1g3835 307 Gene3D Peroxidase, domain 2 121 264 - -
Psa1g3835 307 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PRINTS Haem peroxidase superfamily signature 95 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PRINTS Haem peroxidase superfamily signature 143 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3835 307 CDD secretory_peroxidase 29 284 IPR033905 GO:0004601|GO:0042744
Psa1g3835 307 Gene3D - 92 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3835 Psa-Chr1 318642114 318644045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3835 15 287 Peroxidase AT5G06720 47.649 7.44e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3835 K00430 - gmx:111064645 419.468