Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3834 ATGAATCCACTTGGTCTAAGTTCAAGAGCTTTTTGTTGTGTTGTTGTGTGTGTTCTAATTGGAGGAGTATCTTTCTCTTCAAATGCACAACTTGATCCATCTTTTTACAGCACAACTTGTCCAAATGTTAGTTCCATTGTTCGTGGAGTCCTAACAAATGTTTCTCAGACAGATCCTCGTATGCTTGCTAGTCTCATCAGGCTTCACTTTCACGACTGTTTTGTTCAAGCTCAAGGTCCTACTTGGCAAGTTCCATTGGGAAGAAGGGATAGTTTAACAGCAAATAAAACCCTTGCTACTCAAAATCTTCCAGGCCCCTCTTTCAACCTTAGTCTACTAAAATCTACCTTTCTTATTCAAAACCTCAATACAACCGATCTAGTTGCACTCTCAGGTGGTCATACGATTGGAAGAGGACAGTGCAGATTTTTCGTCGACCGATTATACAATTTCAACAGCACTGGAAATCCTGATACAACTCTTAACACAACCTATTTACAAACATTACAATCAATATGTCCAAATGGTGGACCTGGTACAAATCTCACAGATTTGGACCCTACCACACCTGATACATTTGACTCAAACTATTACTCCAATCTACAAGATGGAAAGGGTTTGTTTCAGAGTGACCAAGAGCTTTTTTCAACTACCGGTGCTGATACTATTGCTATTGTCAATAGTTTCATCAATAATCAAACTCTCTTCTTTGAAAACTTTGTGGCATCAATGATAAAAATGGGAAATCTTGGAGTTTTGACTGGAACTCAAGGTGAAATTAGAACACAATGTAATGCTCTGAATGGGAATTCTTCTTCTGGTTTAGCTTCTGTGGTTACCAAAGAATTACCAGAAGATGGCTTGGCCAGCTCATTCTGA 879 0.3891 MNPLGLSSRAFCCVVVCVLIGGVSFSSNAQLDPSFYSTTCPNVSSIVRGVLTNVSQTDPRMLASLIRLHFHDCFVQAQGPTWQVPLGRRDSLTANKTLATQNLPGPSFNLSLLKSTFLIQNLNTTDLVALSGGHTIGRGQCRFFVDRLYNFNSTGNPDTTLNTTYLQTLQSICPNGGPGTNLTDLDPTTPDTFDSNYYSNLQDGKGLFQSDQELFSTTGADTIAIVNSFINNQTLFFENFVASMIKMGNLGVLTGTQGEIRTQCNALNGNSSSGLASVVTKELPEDGLASSF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3834 292 SUPERFAMILY Heme-dependent peroxidases 30 268 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PRINTS Plant peroxidase signature 212 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 CDD secretory_peroxidase 30 266 IPR033905 GO:0004601|GO:0042744
Psa1g3834 292 Pfam Peroxidase 76 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 Gene3D Peroxidase, domain 2 104 247 - -
Psa1g3834 292 PANTHER PEROXIDASE 72-RELATED 8 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PANTHER PEROXIDASE 72-RELATED 76 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 ProSiteProfiles Plant heme peroxidase family profile. 63 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PANTHER PEROXIDASE 8 76 - -
Psa1g3834 292 PANTHER PEROXIDASE 76 276 - -
Psa1g3834 292 Gene3D - 31 76 - -
Psa1g3834 292 Gene3D - 77 268 - -
Psa1g3834 292 ProSitePatterns Peroxidases proximal heme-ligand signature. 126 136 IPR019793 -
Psa1g3834 292 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3834 292 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3834 Psa-Chr1 318602747 318604772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3834 11 75 Peroxidase AT5G06730 49.231 1.25e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3834 K00430 - gmx:111064645 335.495