Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3748 ATGATTTTAGAGATGGGTTCCATGTGGGTGGTCCTCATGGCCATTGGTGGTGCTCTTTTGGTCCTAAGATCCATTCTCAAAAATGTAAATTGGTGGCTCTATGAATCCAAATTAGGTGTCAAGCAGTACTCTCTGCCACCAGGTGATATGGGATGGCCCTTCATAGGTAACATGTGGTCCTTTCTTAGAGCTTTCAAGTCTAAAGATCCTGACTCCTTCATCTCTTCCATTGTATCCAGATATGGAAGTAGTGGAATATACAAAGCCTTAATGTTTGGAAATCCAAGTGTGATTGTGACAACACCAGAAGGATGCAAAAGAGTTCTAACAGATGATGAAAAATTCACAACTGGTTGGCCTCAATCTACAATAGAGCTCATTGGAAAGAACTCATTCATTGCAATGACTTACGAAGAACACAAGCGCCTTCGACGTTTAACATCGTCTTCCATCAATGGCATGGAAGCATTGTCTTTGTACTTGAAATATATCGAAGAAAACGTTATAATTTCGCTAGAGAAATGGTCTAACATGGGACAAATCGAGTTTTTAACCGAAATTCGGAAGCTTACTTTTAAAATCATTATGCATATTTTTCTTAGTTCAGAAAGTGAACCTGTTATGGAAGCTTTGGAAAAAGAATACACAATACTTAATCATGGAGTTAGAGCTATGCAAATCAATGTTCCTGGATTTGCATACTATAAAGCGCTCAAGGCTAGGAAAAATCTAGTTGGAATATTTCAATCTATTGTGGATGATAGAAGAAACATAAGAAAGGTTTATTCGCAAAAGAAAGCGAAAGATATGATGGATTCTCTTATAGATGTTGAAGATGATAATGGAAGAAAGTTGAATGATGAAGATATCATTGATATAATGTTAATGTACTTGAATGCTGGTCATGAGTCTTCGGGACATATTACAATGTGGGCTACCTATTTCCTACAAAAGCACCCTGAATATCTTAAAAAAGCTAAGGAAGAACAAGAAGAAATAATAAAGAGGAGACCTTCAACACAGAAAGGGTTGACACTTAAGGAAATTCGCGGCATGGATTTTCTTTATAAGGTAATCGATGAAACAATGCGCGTGATAACATTTTCATTGGTGGTTTTTCGAGAGGCGAAATCTGATGTAACTATCAATGGTTATACCATACCAAAAGGTTGGAAAGTGCTTACATGGTTCAGATCAGTTCACCTTGATCCTGAAATATATCCTAATCCAAAGGAATTTAATCCTAATAGATGGAATAAGGAACATAAAGCAGGGGAGTTCCTTCCCTTTGGAGCAGGAACTAGATTATGTCCTGGCAATGATCTTGCCAAAATGGAAATAGCGGTTTTTCTTCATCATTTCACTCTTAATTACCGGCTTGAACAGCTTAATCCTAAATGTCCTATTAGATATTTACCACATACAAGGCCTATGGACAATTGCTTAGGAAGGGTTAAGAAATGTTGA 1467 0.3708 MILEMGSMWVVLMAIGGALLVLRSILKNVNWWLYESKLGVKQYSLPPGDMGWPFIGNMWSFLRAFKSKDPDSFISSIVSRYGSSGIYKALMFGNPSVIVTTPEGCKRVLTDDEKFTTGWPQSTIELIGKNSFIAMTYEEHKRLRRLTSSSINGMEALSLYLKYIEENVIISLEKWSNMGQIEFLTEIRKLTFKIIMHIFLSSESEPVMEALEKEYTILNHGVRAMQINVPGFAYYKALKARKNLVGIFQSIVDDRRNIRKVYSQKKAKDMMDSLIDVEDDNGRKLNDEDIIDIMLMYLNAGHESSGHITMWATYFLQKHPEYLKKAKEEQEEIIKRRPSTQKGLTLKEIRGMDFLYKVIDETMRVITFSLVVFREAKSDVTINGYTIPKGWKVLTWFRSVHLDPEIYPNPKEFNPNRWNKEHKAGEFLPFGAGTRLCPGNDLAKMEIAVFLHHFTLNYRLEQLNPKCPIRYLPHTRPMDNCLGRVKKC* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3748 488 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 Pfam Cytochrome P450 46 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Psa1g3748 488 SUPERFAMILY Cytochrome P450 41 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PANTHER ENT-KAURENOIC ACID OXIDASE 2 16 486 - -
Psa1g3748 488 PANTHER CYTOCHROME P450 26 16 486 - -
Psa1g3748 488 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g3748 488 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3748 Psa-Chr1 314774272 314779693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3748 8 487 Cytochrome P450 AT2G32440 66.528 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3748 K04123 - gmx:100781238 880.937