Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3738 ATGAAAAGAAAACAGGAAGTACATTGTGCTGTGGGAATAGACCTTGGCACGACGTATTCGTGTGTTGCAGTATGGCAGGAGCAACACTGTCGAGTTGAGATCATTCACAACGATCAAGGCAATAGAACTACACCTTCTTTTGTTGCTTTCACCCAAAATCAGAGATTGATCGGTGATGCTGCTAAGAATCAAGCTTCTGCCAACCCTCAAAACACTGTCTTTGATGCTAAACGGTTAATCGGGAGGAAGTTTAGTGATCCTACGGTTCAAGATGATATACTTTTATGGCCATTCAAAGTCGTTGCTGAAGTATCCTCTATGGTACTCACCAAGATGCGAGACATTGCTGAGAAATATTTAGAAACACCGGTTAAGAATGCAGTTATTACTGTACCAGCTTATTTCAATGATTCTCAACGAAAAGCAACTATAGATGCCGGTGTTATTGCTGGTCTCAATGTTATGAGAGTAATGAATGAACCTACTGCTGCAGCGGTTGCATATGGTCTTGACAAGAGAACTAACTTTGATGGAGAAAGAAATATTTTTGTGTTTGATCTTGGGGGTGGCACTTTTGATGTGTCTCTACTAACTATTAAGGGTAATGTGTTCAAAGTTAAGGCAACTGCTGGAAACACTCACCTTGGAGGAGAAGACTTTGATAATAGAATGGTGAAGTACTTCGTACAAGAGTTCAAGAAAAAGAACAAAGCAACTGCTGGAAACACTCACCTTGGAGGAGAAGACTTTGATAATAGAATGGTGAAGTACTTCGTACAAGAGTTCAAGAAAAAGAACAAAGTGGATATTAGTGGAAATGCCAAATCATTGAGGAGGTTGAGAAGTGCTTGTGAGAGGGCAAAAAGATCACTTTCTTTTCTTGTTGTTGCAACTATTGAAGTAGATTCTTTATTTCAAGGCATAGACTTTTCTTCATCAATCAATAGGGCCAAGTTTGAGGAAATGAATATGGATCTTTTTAACGAGTGTATGAAAACGGTTGAGATTTGTCTTACCGAGGCTAAGATGGACAAGAGAAGTGTAGATGATGTTGTTCTTGTGGGTGGATCCTCTAGGATTCCGAAAGTACAAGAGCTATTACAAGACTTTTTTAACGGAAAGGAGTTGTGCATGAGCATCAATCCTGATGAGGCAGTCGCTTATGGGGCAGCTGTTCAGGCTGCATTGTTGAGCGAAGATGTTAAGAACGTTCCAAAGTTGGTGCTGCAGGATGTTACACCATTGTCTCTTGGTATATCTGCATTAGGAGATATCATGAGTGTGGTGATTCCTAAGAACACTTGCATTCCTGTCAATAAGACAAGATCATGTGTTACAAGTCAAGATAACCAAACCAGTACTTTGATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATTTGCTTGGTTCCTTTACTCTTTCTGGCATTCCCCCAGCTCCTCGCGGCAGCCATATCTCAAATGTTTGTTTTGCTATTAATGAAAATGGTATTTTGACTGTTTCAGCTAATAATAATGTTTCTGGAGTTTTGAACGCAATTACAATAACCAATCACAGAGATAGATTGTCAAGTGAGGAAATTAAAAAATTAATTCAAGAAGCTGAGAAATACCATATTGAAGACAAGAAATTCCTAAGGAAGGCCACAACACTGAATGCATTGGATGACTACCTTTACAAAATGAGAAATGCTTTAAAGAAAGAGGATATTAATCTAAAGCTCTCCTCTCAAGAAATTGAGATTATCGAATCCACGATTTCTGCGATTGCAAATTTGATTGATGAGAATAACCAAGAGGTTGAAATAGATGTTTTGGAGGACCATCTAAAGGGACTTAAGAGTACCATGGAAGACATTTTAGCTAAGACTATTTAG 1887 0.3879 MKRKQEVHCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSFVAFTQNQRLIGDAAKNQASANPQNTVFDAKRLIGRKFSDPTVQDDILLWPFKVVAEVSSMVLTKMRDIAEKYLETPVKNAVITVPAYFNDSQRKATIDAGVIAGLNVMRVMNEPTAAAVAYGLDKRTNFDGERNIFVFDLGGGTFDVSLLTIKGNVFKVKATAGNTHLGGEDFDNRMVKYFVQEFKKKNKATAGNTHLGGEDFDNRMVKYFVQEFKKKNKVDISGNAKSLRRLRSACERAKRSLSFLVVATIEVDSLFQGIDFSSSINRAKFEEMNMDLFNECMKTVEICLTEAKMDKRSVDDVVLVGGSSRIPKVQELLQDFFNGKELCMSINPDEAVAYGAAVQAALLSEDVKNVPKLVLQDVTPLSLGISALGDIMSVVIPKNTCIPVNKTRSCVTSQDNQTSTLIKVYEGERTRASDNNLLGSFTLSGIPPAPRGSHISNVCFAINENGILTVSANNNVSGVLNAITITNHRDRLSSEEIKKLIQEAEKYHIEDKKFLRKATTLNALDDYLYKMRNALKKEDINLKLSSQEIEIIESTISAIANLIDENNQEVEIDVLEDHLKGLKSTMEDILAKTI* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3738 628 SUPERFAMILY Actin-like ATPase domain 237 397 IPR043129 -
Psa1g3738 628 PANTHER HEAT SHOCK 70 KDA PROTEIN 237 626 - -
Psa1g3738 628 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 237 - -
Psa1g3738 628 ProSitePatterns Heat shock hsp70 proteins family signature 3. 351 365 IPR018181 -
Psa1g3738 628 PANTHER HEAT SHOCK PROTEIN 70KDA 237 626 IPR013126 GO:0005524|GO:0140662
Psa1g3738 628 PANTHER HEAT SHOCK PROTEIN 70KDA 8 237 IPR013126 GO:0005524|GO:0140662
Psa1g3738 628 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 555 627 IPR029048 -
Psa1g3738 628 Pfam Hsp70 protein 237 625 IPR013126 GO:0005524|GO:0140662
Psa1g3738 628 Gene3D - 378 395 - -
Psa1g3738 628 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 401 555 IPR029047 -
Psa1g3738 628 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Psa1g3738 628 Coils Coil 606 626 - -
Psa1g3738 628 SUPERFAMILY Actin-like ATPase domain 177 238 IPR043129 -
Psa1g3738 628 ProSitePatterns Heat shock hsp70 proteins family signature 2. 184 197 IPR018181 -
Psa1g3738 628 SUPERFAMILY Actin-like ATPase domain 10 172 IPR043129 -
Psa1g3738 628 Gene3D - 173 216 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 9 22 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 39 51 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 61 69 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 127 147 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 348 364 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 380 400 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 406 425 - -
Psa1g3738 628 PRINTS 70kDa heat shock protein signature 487 503 - -
Psa1g3738 628 Pfam MreB/Mbl protein 11 233 - -
Psa1g3738 628 Gene3D Actin; Chain A, domain 4 246 329 - -
Psa1g3738 628 Gene3D - 74 101 - -
Psa1g3738 628 Gene3D - 238 377 - -
Psa1g3738 628 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 403 558 IPR029047 -
Psa1g3738 628 Gene3D Actin; Chain A, domain 4 217 237 - -
Psa1g3738 628 Gene3D - 556 628 IPR029048 -
Psa1g3738 628 Gene3D - 11 73 - -
Psa1g3738 628 Gene3D - 108 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3738 Psa-Chr1 314124380 314126576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3738 10 626 Calmodulin-binding Proteins AT3G12580 60.312 0.0 759