Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3737 ATGAAGAGAAAACAGGAAGCACATTGTGCTGTGGGAATAGACCTTGGCACAACGTATTCATGTGTTGCAGTATGGCAGGAACAACACTGTCGAGTTGAGATCATTCACAACGATCAAGGCAATCGAACTACACCTTCTTTTGTTGCTTTCACACAGAATCAGAGATTAATCGGTGATGCTGCTAAGAATCAAGCTGCTGCAAACCCTCAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTTAGTGATCCTATTGTTCAAGATGATATACTTTTATGGCCATTCAAAGTCATTGCTGGTGTTGATGACAGACCCATGATTATGGTTAAGTACAAGGGTCAGGAGAAACAACTATATGCCGAAGAAGTATCCTCTATGGTACTCACCAAAATGCGAGAGATTGCCGAGTCATATTTAGAATCAAATGTTAAGAATGCAGTTGTTACTGTGCCAGCTTACTTCAATGATTCTCAACGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTCAATGTTATGAGAGTAATGAATGAACCTACTGCTGCAGCGGTTGCATATGGTCTTGACAAGAGAACTAACTTTGATGGAGAAAGAAATATTTTTGTGTTTGATCTTGGGGGTGGCACTTTTGATGTGTCTTTACTAACCATTAAAGGTAATGTGTTCAATGTTAAGGCAACTGCTGGAAACACTCACCTTGGAGGAGAAGACTTTGATAATAGAATGGTGAACTACTTTGTACAAGAGTTCAATAGAAAGAACAAAGTGGATATTAATGGAAATCCCAAAGCATTGAGAAGATTGAGAACTGCATGTGAGAGGGCAAAAAGATCACTTTCTTTCCTTGTTGTTGCAACTATTGAAGTAGATTCTTTATTTCAAGGCATTGACTTTTCTTCATCTATCAATAGAGCCAAATTTGAGGAAATGAACATGGACCTTTTCATTGAGTGTATGAAGATTGTTGAAAGCTGTGTAATGGATGCTAAGATGGACAAGAGCAAGATAGACGATGTCGTCCTCGTTGGGGGGTCTTCAAGGATTCCAAAAGTACAGCAGCTATTGCAGGACTTTTTCAATGGGAAAGAGCTATGCAAGAGCATTAATCCTGATGAGGCTGTGGCTTATGGGGCAGCTGTTCAGGCTGCTATGTTGAGTGAAGACATTAAGAATGTTCCAAATTTGGAGCCGCAGAATAACTCACAGTTGGTGCTGCATAATGTTCCACAGTTGGTGCTGCAGGATGTTACACCATTGTCTCTTGGTATATCTGCATTAGGAGATATCATGAGTGTGGTGATTCCTAAGAACACTTGCATTCCTGTCAATAAGACAATATCATGTGTTACAAGTCAAGATAACCAAACCAGTGCTTTGATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCGGTGACAACAACTTGCTTGGTTCTTTTATTCTTTCTGGCATTCCCCCAGCTCCCCGCTGTTCCCCTTTTTCAGTTGTTTGTTTTGATATCAATGAAAATGGTATTTTAACTGTTTCAGCTAAGAATAATGCTTCTGGAACTTCCAACAAGATTACAATAACCAATCACAAAGAAAGATTGTCAAGCGAGGATATTAAAAAATTAATTCAAGAAGCTGAGAATTACCATATTGAAGATAAGAAATTCCTCCGAAAGGCAAATGCACTGAATGCATTGGATGACTACATTTACAAAATGAGAACCACTTTAAAGAAAGAGGATATCGATACAATGCTCTCCTCGGAAGAAATTGAGAAGATCAGATCTACAATCGTGGTTACAACATATTTGGTTGATGAGAATAACCATGTGGTTGAAATAGATGATATGGAGGACCTTCTAAAAGAGCTTAAAACTAGCATGGAACACATTATTGCTAAGACTATTTAG 1911 0.3888 MKRKQEAHCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSFVAFTQNQRLIGDAAKNQAAANPQNTVFDAKRLIGRKFSDPIVQDDILLWPFKVIAGVDDRPMIMVKYKGQEKQLYAEEVSSMVLTKMREIAESYLESNVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVMRVMNEPTAAAVAYGLDKRTNFDGERNIFVFDLGGGTFDVSLLTIKGNVFNVKATAGNTHLGGEDFDNRMVNYFVQEFNRKNKVDINGNPKALRRLRTACERAKRSLSFLVVATIEVDSLFQGIDFSSSINRAKFEEMNMDLFIECMKIVESCVMDAKMDKSKIDDVVLVGGSSRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAMLSEDIKNVPNLEPQNNSQLVLHNVPQLVLQDVTPLSLGISALGDIMSVVIPKNTCIPVNKTISCVTSQDNQTSALIKVYEGERTRAGDNNLLGSFILSGIPPAPRCSPFSVVCFDINENGILTVSAKNNASGTSNKITITNHKERLSSEDIKKLIQEAENYHIEDKKFLRKANALNALDDYIYKMRTTLKKEDIDTMLSSEEIEKIRSTIVVTTYLVDENNHVVEIDDMEDLLKELKTSMEHIIAKTI* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3737 636 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 411 567 IPR029047 -
Psa1g3737 636 Gene3D - 564 636 IPR029048 -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 9 22 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 39 51 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 61 69 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 149 169 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 212 222 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 340 356 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 372 392 - -
Psa1g3737 636 PRINTS 70kDa heat shock protein signature 495 511 - -
Psa1g3737 636 PANTHER HEAT SHOCK PROTEIN 70KDA 7 634 IPR013126 GO:0005524|GO:0140662
Psa1g3737 636 Pfam Hsp70 protein 10 634 IPR013126 GO:0005524|GO:0140662
Psa1g3737 636 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 410 563 IPR029047 -
Psa1g3737 636 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 562 635 IPR029048 -
Psa1g3737 636 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Psa1g3737 636 PANTHER HEAT SHOCK 70 KDA PROTEIN 7 634 - -
Psa1g3737 636 Coils Coil 614 634 - -
Psa1g3737 636 SUPERFAMILY Actin-like ATPase domain 199 390 IPR043129 -
Psa1g3737 636 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Psa1g3737 636 Gene3D - 74 129 - -
Psa1g3737 636 Gene3D Actin; Chain A, domain 4 238 321 - -
Psa1g3737 636 SUPERFAMILY Actin-like ATPase domain 10 194 IPR043129 -
Psa1g3737 636 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Psa1g3737 636 Gene3D - 11 387 - -
Psa1g3737 636 Gene3D - 195 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3737 Psa-Chr1 314063296 314065319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3737 10 634 Calmodulin-binding Proteins AT3G12580 64.800 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3737 K03283 - gmx:102667578 862.833