Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g3731 | ATGGCGAGAAAATACGAAGGACGTGCCGTGGGAATAGACCTTGGCACAACGTACTCATGTGTTGCAGTATGGCAGGAGCAACACTGTCGAGTTGAGATCATTCATAACGACCAAGGCAACAGAACAACACCTTCTTTTGTTGCTTTCAACCAAAATCAGAGATTGATCGGTGATGCTGCTAAGAATCAAGCTGCTGCAAACCCGGAAAATACTGTTTTTGATGCTAAGAGGTTAATCGGTAGGAAGTTTAGTGATCCTATTGTTCAAGATGATATACTTTTATGGCCATTCAAAGTCATTGCTGGTGTTGATGACAGACCCATGATTATGGTTAAGTACAAGGGTCAGGAGAAACAACTATATGCCGAAGAAGTATCCTCTATGGTACTCACCAAAATGCGAGAGATTGCCGAGTCATATTTAGAATCAAATGTTAAGAATGCAGTTGTTACTGTGCCAGCTTATTTTAATGATTCTCAACGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTCAATGTTATGAGAGTAATGAATGAACCTACTGCTGCAGCTGTTGCATATGGTCTTGACAAGAGAACTAACTTTGATGGAGAAAGAAATATTTTTGTGTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTTTACTAACCATTAAAGGTAATGTGTTCAATGTTAAGGCAACTGCTGGAAACACTCACCTTGGAGGAGAAGACTTTGATAATAGAATGGTGAACTACTTCATACAAGAGTTCAATAGAAAGAACAAAGTGGATATTAATGGAAATCCCAGAGCATTGAGAAGATTGAGAAGTGCATGTGAGAGGGCAAAAAGATCACTTTCTTTCCTTGTTGTTGCAACTATTGAAGTAGATTCTTTATTTCAAGGCATTGACTTTTCTTCATCCATCAATAGAGCCAAGTTTGAAGAGATGAATATGGACCTTTTCGACGAGTGTATGAAGAGATGTCCAAAGCGTGTAATGGATGCTAAGATGGACAAGAGGCAAGAGTTGTGCAAAAGCATTAATCCTGATGAGGCTGTGGCTTATGGGGCAGCTGTTCAGGCTGCTATGTTGAGTGAAGACATTAAGAATGTTCCAAATTTGGAGCCGCAGAATAATTCACAGTTGGTTCTGCATAATGTTCCACAGTTGGTGCTGCAGGATGTTACACCATTGTCTCTTGGTATATCTGCATTAGGAGATATCATGAGTGTGGTGATTCCTAAGAACACTTGCATTCCTGTCAATAAGACAACATCATGTGTTACAAGTCAAGATAACCAAACCATTGCTTTAATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATTTGCTTGGTTCTTTTATTCTTTCTGGCATTCCCCCAGCTCCCCGCGGTTCCCCTTTTTCAGTTGTTTGTTTTGATATCAATGAAAATGGTATTTTAACTGTTTCAGCTAAGAATAATGCTTCTGGAACTTCCAACAAGATTACAATAACCAATCACAAAGAAAGATTGTCAAGCGAGGAAATTAAAAAATTAATTCAAGAAGCTGAGAATTACCATATTGAAGACAAGAAATTCCTCCGAAAGGCCAATGCACTGAATGCATTGGATGAATACATTTACAAAATGAGAAATGCTTTAAAGAAAGAGGATATTGATACAATGCTCTCCTCGGAAGAAATTGAGAAGATCAGATCTACAATCGTGGTTACAACATATTTGGTTGACAAGAATAACCATGTGGTTGAAATAGATGATTTGGAGGACCTTCTAAAAGAGCTTAAAACTAGCATGGAACACATTATTGCTAAGACTATTTAG | 1827 | 0.3864 | MARKYEGRAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSFVAFNQNQRLIGDAAKNQAAANPENTVFDAKRLIGRKFSDPIVQDDILLWPFKVIAGVDDRPMIMVKYKGQEKQLYAEEVSSMVLTKMREIAESYLESNVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVMRVMNEPTAAAVAYGLDKRTNFDGERNIFVFDLGGGTFDVSLLTIKGNVFNVKATAGNTHLGGEDFDNRMVNYFIQEFNRKNKVDINGNPRALRRLRSACERAKRSLSFLVVATIEVDSLFQGIDFSSSINRAKFEEMNMDLFDECMKRCPKRVMDAKMDKRQELCKSINPDEAVAYGAAVQAAMLSEDIKNVPNLEPQNNSQLVLHNVPQLVLQDVTPLSLGISALGDIMSVVIPKNTCIPVNKTTSCVTSQDNQTIALIKVYEGERTRASDNNLLGSFILSGIPPAPRGSPFSVVCFDINENGILTVSAKNNASGTSNKITITNHKERLSSEEIKKLIQEAENYHIEDKKFLRKANALNALDEYIYKMRNALKKEDIDTMLSSEEIEKIRSTIVVTTYLVDKNNHVVEIDDLEDLLKELKTSMEHIIAKTI* | 609 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g3731 | 608 | Gene3D | - | 73 | 128 | - | - | |
Psa1g3731 | 608 | Gene3D | - | 194 | 337 | - | - | |
Psa1g3731 | 608 | Gene3D | - | 10 | 193 | - | - | |
Psa1g3731 | 608 | SUPERFAMILY | Actin-like ATPase domain | 9 | 193 | IPR043129 | - | |
Psa1g3731 | 608 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 534 | 607 | IPR029048 | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 38 | 50 | - | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 60 | 68 | - | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 148 | 168 | - | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 211 | 221 | - | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 386 | 405 | - | - | |
Psa1g3731 | 608 | PRINTS | 70kDa heat shock protein signature | 467 | 483 | - | - | |
Psa1g3731 | 608 | Coils | Coil | 579 | 606 | - | - | |
Psa1g3731 | 608 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Psa1g3731 | 608 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 205 | 218 | IPR018181 | - | |
Psa1g3731 | 608 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 383 | 539 | IPR029047 | - | |
Psa1g3731 | 608 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 337 | 606 | IPR013126 | GO:0005524|GO:0140662 | |
Psa1g3731 | 608 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 4 | 337 | IPR013126 | GO:0005524|GO:0140662 | |
Psa1g3731 | 608 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 382 | 535 | IPR029047 | - | |
Psa1g3731 | 608 | PANTHER | HEAT SHOCK 70 KDA PROTEIN | 337 | 606 | - | - | |
Psa1g3731 | 608 | PANTHER | HEAT SHOCK 70 KDA PROTEIN | 4 | 337 | - | - | |
Psa1g3731 | 608 | SUPERFAMILY | Actin-like ATPase domain | 198 | 361 | IPR043129 | - | |
Psa1g3731 | 608 | Gene3D | - | 536 | 608 | IPR029048 | - | |
Psa1g3731 | 608 | Pfam | Hsp70 protein | 338 | 606 | IPR013126 | GO:0005524|GO:0140662 | |
Psa1g3731 | 608 | Pfam | Hsp70 protein | 9 | 336 | IPR013126 | GO:0005524|GO:0140662 | |
Psa1g3731 | 608 | Gene3D | Actin; Chain A, domain 4 | 237 | 320 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g3731 | Psa-Chr1 | 313840842 | 313843120 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g3731 | 1 | 606 | Calmodulin-binding Proteins | AT3G12580 | 60.506 | 0.0 | 753 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g3731 | K03283 | - | gmx:102667578 | 822.387 |