Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3731 ATGGCGAGAAAATACGAAGGACGTGCCGTGGGAATAGACCTTGGCACAACGTACTCATGTGTTGCAGTATGGCAGGAGCAACACTGTCGAGTTGAGATCATTCATAACGACCAAGGCAACAGAACAACACCTTCTTTTGTTGCTTTCAACCAAAATCAGAGATTGATCGGTGATGCTGCTAAGAATCAAGCTGCTGCAAACCCGGAAAATACTGTTTTTGATGCTAAGAGGTTAATCGGTAGGAAGTTTAGTGATCCTATTGTTCAAGATGATATACTTTTATGGCCATTCAAAGTCATTGCTGGTGTTGATGACAGACCCATGATTATGGTTAAGTACAAGGGTCAGGAGAAACAACTATATGCCGAAGAAGTATCCTCTATGGTACTCACCAAAATGCGAGAGATTGCCGAGTCATATTTAGAATCAAATGTTAAGAATGCAGTTGTTACTGTGCCAGCTTATTTTAATGATTCTCAACGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTCAATGTTATGAGAGTAATGAATGAACCTACTGCTGCAGCTGTTGCATATGGTCTTGACAAGAGAACTAACTTTGATGGAGAAAGAAATATTTTTGTGTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTTTACTAACCATTAAAGGTAATGTGTTCAATGTTAAGGCAACTGCTGGAAACACTCACCTTGGAGGAGAAGACTTTGATAATAGAATGGTGAACTACTTCATACAAGAGTTCAATAGAAAGAACAAAGTGGATATTAATGGAAATCCCAGAGCATTGAGAAGATTGAGAAGTGCATGTGAGAGGGCAAAAAGATCACTTTCTTTCCTTGTTGTTGCAACTATTGAAGTAGATTCTTTATTTCAAGGCATTGACTTTTCTTCATCCATCAATAGAGCCAAGTTTGAAGAGATGAATATGGACCTTTTCGACGAGTGTATGAAGAGATGTCCAAAGCGTGTAATGGATGCTAAGATGGACAAGAGGCAAGAGTTGTGCAAAAGCATTAATCCTGATGAGGCTGTGGCTTATGGGGCAGCTGTTCAGGCTGCTATGTTGAGTGAAGACATTAAGAATGTTCCAAATTTGGAGCCGCAGAATAATTCACAGTTGGTTCTGCATAATGTTCCACAGTTGGTGCTGCAGGATGTTACACCATTGTCTCTTGGTATATCTGCATTAGGAGATATCATGAGTGTGGTGATTCCTAAGAACACTTGCATTCCTGTCAATAAGACAACATCATGTGTTACAAGTCAAGATAACCAAACCATTGCTTTAATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGTGACAACAATTTGCTTGGTTCTTTTATTCTTTCTGGCATTCCCCCAGCTCCCCGCGGTTCCCCTTTTTCAGTTGTTTGTTTTGATATCAATGAAAATGGTATTTTAACTGTTTCAGCTAAGAATAATGCTTCTGGAACTTCCAACAAGATTACAATAACCAATCACAAAGAAAGATTGTCAAGCGAGGAAATTAAAAAATTAATTCAAGAAGCTGAGAATTACCATATTGAAGACAAGAAATTCCTCCGAAAGGCCAATGCACTGAATGCATTGGATGAATACATTTACAAAATGAGAAATGCTTTAAAGAAAGAGGATATTGATACAATGCTCTCCTCGGAAGAAATTGAGAAGATCAGATCTACAATCGTGGTTACAACATATTTGGTTGACAAGAATAACCATGTGGTTGAAATAGATGATTTGGAGGACCTTCTAAAAGAGCTTAAAACTAGCATGGAACACATTATTGCTAAGACTATTTAG 1827 0.3864 MARKYEGRAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSFVAFNQNQRLIGDAAKNQAAANPENTVFDAKRLIGRKFSDPIVQDDILLWPFKVIAGVDDRPMIMVKYKGQEKQLYAEEVSSMVLTKMREIAESYLESNVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVMRVMNEPTAAAVAYGLDKRTNFDGERNIFVFDLGGGTFDVSLLTIKGNVFNVKATAGNTHLGGEDFDNRMVNYFIQEFNRKNKVDINGNPRALRRLRSACERAKRSLSFLVVATIEVDSLFQGIDFSSSINRAKFEEMNMDLFDECMKRCPKRVMDAKMDKRQELCKSINPDEAVAYGAAVQAAMLSEDIKNVPNLEPQNNSQLVLHNVPQLVLQDVTPLSLGISALGDIMSVVIPKNTCIPVNKTTSCVTSQDNQTIALIKVYEGERTRASDNNLLGSFILSGIPPAPRGSPFSVVCFDINENGILTVSAKNNASGTSNKITITNHKERLSSEEIKKLIQEAENYHIEDKKFLRKANALNALDEYIYKMRNALKKEDIDTMLSSEEIEKIRSTIVVTTYLVDKNNHVVEIDDLEDLLKELKTSMEHIIAKTI* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3731 608 Gene3D - 73 128 - -
Psa1g3731 608 Gene3D - 194 337 - -
Psa1g3731 608 Gene3D - 10 193 - -
Psa1g3731 608 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Psa1g3731 608 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 534 607 IPR029048 -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 8 21 - -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 38 50 - -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 60 68 - -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 148 168 - -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 211 221 - -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 386 405 - -
Psa1g3731 608 PRINTS 70kDa heat shock protein signature 467 483 - -
Psa1g3731 608 Coils Coil 579 606 - -
Psa1g3731 608 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Psa1g3731 608 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Psa1g3731 608 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 383 539 IPR029047 -
Psa1g3731 608 PANTHER HEAT SHOCK PROTEIN 70KDA 337 606 IPR013126 GO:0005524|GO:0140662
Psa1g3731 608 PANTHER HEAT SHOCK PROTEIN 70KDA 4 337 IPR013126 GO:0005524|GO:0140662
Psa1g3731 608 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 382 535 IPR029047 -
Psa1g3731 608 PANTHER HEAT SHOCK 70 KDA PROTEIN 337 606 - -
Psa1g3731 608 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 337 - -
Psa1g3731 608 SUPERFAMILY Actin-like ATPase domain 198 361 IPR043129 -
Psa1g3731 608 Gene3D - 536 608 IPR029048 -
Psa1g3731 608 Pfam Hsp70 protein 338 606 IPR013126 GO:0005524|GO:0140662
Psa1g3731 608 Pfam Hsp70 protein 9 336 IPR013126 GO:0005524|GO:0140662
Psa1g3731 608 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3731 Psa-Chr1 313840842 313843120 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3731 1 606 Calmodulin-binding Proteins AT3G12580 60.506 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3731 K03283 - gmx:102667578 822.387