Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3716 ATGGCCATGGAAACCGAAGTTGCCACCACCACTCCACAGTTGGCCCTGTCTGATACAGACATCAACTGGGACAGATTGGATAAGACTAGGTTCCATATCATTGGTGCAATACTTTTCACAGCTCAATCAGCATTACTTCATCCAACAGCAGTGGTGAAAACAAGGATGCAAGTAGCTAGTTCAGGACTCTCTAACATGAAGGGAGTGTCAGTGTTCACTCACATTTTGAAGAGTGATGGAATTCCTGGAATCTTTAGAGGTTTTGGTACTTCTGCTATTGGATCAATGCCTGGTAGGGTTTTAGCCCTCACATCTCTTGAGATGTCAAAGGATATTGTGTTGAAACAGACTCAAGGTAGTGATATTCCTGAAGCATCACGTATTGGCCTTGCAAATGGAGTTGCTGGCATGGTTTCAAATTTGGTGTCTTGTGTTTATTTTGTGCCCTTGGATGTGATTTGCCAGAGATTAATGGTTCAAGGCCTACCTGGAACTTCGTCTTGTCGAGGACCATTTGATGTTATCCGAAGAGTAGTGCATGCGGAGGGCTTTCGTGGTTTGTATAGAGGTTTTGGATTAACGGCTGTTACACAATCTCCAGCATCTGCACTTTGGTGGGGTTCATATGGTGCAGCACAACACATAATTTGGAGGAGTTTGGGATATAAAGATGATATGGATATGAAACCGTCACATGTGGAAATGGTTACAGTTCAGGCTACTGCTGGGATGGTGGCGGGTGCTTGTTCCTCTGTTATCACTACTCCCATAGATACCGTTAAAACACGACTTCAGGTTATGGACAATTATGGTTCGGGAAGACCATCGGTACCGAAGACGGCAAGAACTCTCCTTAACGAAGATGGATGGTGGGGATTTTACCGAGGGTTTGGACCAAGATTTTTGAATATGTCACTTTATGGAACAACTATGATTGTTACTTATGAACTCATAAAGAGATTATCGGTACGACCAAGTTTGAGTTCTTTTGGCTAA 996 0.4337 MAMETEVATTTPQLALSDTDINWDRLDKTRFHIIGAILFTAQSALLHPTAVVKTRMQVASSGLSNMKGVSVFTHILKSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDIVLKQTQGSDIPEASRIGLANGVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTSSCRGPFDVIRRVVHAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYKDDMDMKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVPKTARTLLNEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVRPSLSSFG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3716 331 Gene3D Mitochondrial carrier domain 29 325 IPR023395 -
Psa1g3716 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 112 IPR018108 -
Psa1g3716 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 321 IPR018108 -
Psa1g3716 331 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 324 - -
Psa1g3716 331 SUPERFAMILY Mitochondrial carrier 24 317 IPR023395 -
Psa1g3716 331 Pfam Mitochondrial carrier protein 238 322 IPR018108 -
Psa1g3716 331 Pfam Mitochondrial carrier protein 33 115 IPR018108 -
Psa1g3716 331 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Psa1g3716 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Psa1g3716 331 PANTHER OS01G0329400 PROTEIN 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3716 Psa-Chr1 312795941 312798619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3716 18 321 Chloroplast and Mitochondria Gene Families AT5G15640 50.980 9.67e-108 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3716 K15121 - gmx:112997745 567.385