Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3677 ATGGCGTTTTGGTGGTCCTTGCTCGTTCTCGCTTTCGCTTTCGCTGTCTGCAAATTCCTTCTCATGCTCATTCCTCCCAAGGTTCCTTCCATCGACGTTGACGCTTCCGATGTGTTGGAAGATGGAAACCAATCGCAGGAGAATAGCTTCATATACGTGCCTCCGAGGGGAACGGCGCAGCAATCGGGCAAGAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATATTTGGGATACGTTCCTGCTTTGACATCAGACGAGGTCAAGGAGCAAATTGAAAAAGTACGGAAGGCACAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGGCGCCAGTTTTTGCGTATACTATTGAAGTATATAATTAAACATCAAGCACTAATTTGCGAGATTTCATCACGTGATACTGGAAAAACAATGGTAGATGCCTCTCTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGTGAACAATGTCTGAAACCTGAGTACAGATCCTCTGGAAGAGCAATGCTTCATAAAAGATCCAGAGTAGAATTTCACCCCCTTGGAGTTATAGGGGCCATTGTGTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATATCAGAGCATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCGGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCGGAAACAGGAGAAGCACTGGTGTCTTCTGTTGATAAAGTCATTTTTGTTGGATCACCCGGGGTTGGTAAGATGATAATGAAAAATGCTGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTTTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGATTTTATGTCCATAGGAACATTTATCCATCTTTTGTCAGTAAAATTACCAAAATCATAAAATCTGTTACAGCTGGTCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCATGAACATTCTGAAAAGCTTGAAGGTCTTGTAAATGACGCATTAGACAAAGGAGCTGAAATTGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAGTATTTTCCCCCTACTGTGATTGTAAATGTGAATCACTCCATGAGATTGATGCAAGAAGAGGCATTTGGACCTATCATGCCAATAATGAAGTTTAGCTCTGATGAAGAAGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTTGGCTGCGCTGTTTTCTCAGGCAGCCAAAGTCATGCTAGAGAGATAGCTTCTCATATACATTGTGGGGTAGCTGCAGTTAATGATTTTGCATCAAATTATATGTGTCAGTCGCTGCCTTTTGGGGGAGTGAAACACAGTGGATTTGGACGCTTTGGTGGTGTTGAAGGCCTGCGAGCATGCTGCCTTGTGAAATCAGTTGTTGAAGATAGATGGTGGCCATTCATCAAGACAAAAATACCTAAGCCTATTCAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCACTATATGGGCTTAGCATATGGGATCGTTTGCAAGCATTGGTTACCGTTTTGAAAATGCTGACTGAACAGAGTAAGAAGGAGAAATGA 1773 0.4275 MAFWWSLLVLAFAFAVCKFLLMLIPPKVPSIDVDASDVLEDGNQSQENSFIYVPPRGTAQQSGKKVQCYEPATMKYLGYVPALTSDEVKEQIEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQCLKPEYRSSGRAMLHKRSRVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMKNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAFLQSSGQNCAGAERFYVHRNIYPSFVSKITKIIKSVTAGPPLAGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLGCAVFSGSQSHAREIASHIHCGVAAVNDFASNYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVTVLKMLTEQSKKEK* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3677 590 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Psa1g3677 590 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Psa1g3677 590 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Psa1g3677 590 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Psa1g3677 590 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Psa1g3677 590 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 561 - -
Psa1g3677 590 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Psa1g3677 590 CDD ALDH_F15-22 69 531 - -
Psa1g3677 590 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3677 Psa-Chr1 309938456 309946019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3677 1 586 Aldehyde Dehydrogenase Gene Family AT3G66658 81.399 0.0 1032