Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3658 ATGTTCCACTCACAAGTTAAACTAATCAACGACAAACAACATTTCTTCCCAAGTTTCAAACCGTCAACAAACAACATGAAATTCATCAACAACATTGACCTCAAAATTTTCTACATAGTCGTACTATGTTTTGCAGTAGAAAACTGCATGGCTCACGTATTCACAGATCACCCAGCAACAAACATTGAACCACATCCTGTGTTCCGTCATCACCCGGGTAATCATCACCAGGCGAATCATCACCAGGCTAATCATCACCAGGCGAATCCTCACCCCGCGGAGCCTCCGGCCGAATTTTCACACTCACAATCACCTCAAGAAGCTCCCATGACAGAATTAGAATTAGAACCAGAATTAGCGCACGGACGCACATCTTTCGGTCATTCATCTTCCTTCAAAGCTGCATTCTCTGACATTCTCAAAGGTTCCATTCACAATCCCCCTGAGTTAAAGTCCCAAAAATCCGAAGCAAAACAAAGCAGTCTCGGAATCGAACAGATATGCATGCACACCGAATACCCCGACATTTGTCTCGCAACTATCAACCCTCTTCTAACTCAGAACTTCGACATGATTAATGTCCTCGAAGCCGCCATAAAAGCCTGTTCCATTCAAATAAAGTTGACAATAGCAAAGGTGGCTAAACATGCAGCTAGGAATCCAGAGGTTGCTAATGCGGTTTTTGAATGTAGGGATCAATACAAAAATGCTATGGATAATCTTCAAAAAGCTATGGACGCTCTTCCCGTGCGTGATCTCGGTACCGTTACCGTTATGCTTAGTACTGTTATGGCTGATGTTTCTACCTGTGAAAGTGCTTTTGAGGATCTTAAACAATCACCTCATAATGAACAGTCTAAGTCTGATGGTTTAGTTAGTATCACTGTTAGCAATTGTCTTTCAATTGCTAGTTTGATTCCCTATTAA 927 0.4207 MFHSQVKLINDKQHFFPSFKPSTNNMKFINNIDLKIFYIVVLCFAVENCMAHVFTDHPATNIEPHPVFRHHPGNHHQANHHQANHHQANPHPAEPPAEFSHSQSPQEAPMTELELEPELAHGRTSFGHSSSFKAAFSDILKGSIHNPPELKSQKSEAKQSSLGIEQICMHTEYPDICLATINPLLTQNFDMINVLEAAIKACSIQIKLTIAKVAKHAARNPEVANAVFECRDQYKNAMDNLQKAMDALPVRDLGTVTVMLSTVMADVSTCESAFEDLKQSPHNEQSKSDGLVSITVSNCLSIASLIPY* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3658 308 CDD PMEI-like_2 164 306 - -
Psa1g3658 308 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 164 306 IPR035513 -
Psa1g3658 308 PANTHER PECTINESTERASE INHIBITOR-LIKE 135 306 - -
Psa1g3658 308 PANTHER PECTINESTERASE INHIBITOR-LIKE 135 306 - -
Psa1g3658 308 SMART PMEI_2 159 302 IPR006501 GO:0004857
Psa1g3658 308 TIGRFAM PME_inhib: pectinesterase inhibitor domain 158 303 IPR006501 GO:0004857
Psa1g3658 308 MobiDBLite consensus disorder prediction 74 114 - -
Psa1g3658 308 Pfam Plant invertase/pectin methylesterase inhibitor 164 302 IPR006501 GO:0004857
Psa1g3658 308 Gene3D Invertase/pectin methylesterase inhibitor family protein 163 307 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3658 143 307 Carbohydrate Esterase AT3G06830 24.309 8.28e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3658 - - mtr:MTR_2g034220 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3658 1 309222220 309223448 Psa1g3658 1 309222220 309223448 ECH