Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3657 ATGCACATAACTATGGTAAAATCTAGCTCTTGTTTAAGACTAATCACATGCAGTGGTGGTGGTGAGAAAGGACAAGATCAACGAGTTGTTTATGAGGTTAAGGATTCTAATGATAAACGTGGTTGGAGTTTTCGGAAGAGAGTTGCGAGGCATCGCATGCTTAGCAATGCTGTGATAGCTGTAACAGAGACTCCAACTTCGGCAAATAAGGAGATTTCGGAATATTCAAGTGTTAATTTTCAATCTCCGGCTGAATCTATTGTTGTTGAGAAGATTTATTTGACGACTCTGACACATGAAGCGAATCCTAAAAAACCAGATAGATCCCAGCAAACAAGTACTCCGGTCACTGCAACCATTGCAGCACCGGCATCACCTTACAGAAGCAGTCCCAGTCTCAGTCCCACTGTACAAATGAAATGTCTCCCGGACGCCAAACCATTTGCAGACTATGAAGAAGAATCTTCCAAAGTATCTGCGCATCTTGCACATCGGTACTCGAAACATTGCAAGAAAGCAGTAAAGGCAGGCCATGAATCACCTGCATTAGTAGAACGTGTATATCTCCTGACAATGAAGGTTATGTCTCCTGAGAGCTCCCTTGACAAGCTTTTGAATCTTGTGGAGAGAAATCATCAACTGGCGTGTGATCTAGAGGCTGAGGGTCGTGGCCCAAGGTCACGACGATCTCACTGTTTTCTAGCTCCCAATGGCACCGTAACAGACACTGTCCCATCGTTCCTTGCAAAATGCTTCACAAGTTCCGAGGTTCCGGGAGATATAAACGTTCTACTAATGCAGGTGATTCATGCCGCCTTTACTGCTTTTGCAATGTTTCGAGTACCGATGTGCAAGATGCGAGATACTTTTGGAAGATTCTTCTACATAGTGTACAAATGGTTGGGCGTCCGAGAGACATTTCATTGTAACAGTGGGACTGAGACTGGGACTGTTCTGTATAGTGAGCCCGGTGCTGCAATGGTTGGCAGTGACCGAGTACTATGTTTGCTTGGATCTATCTGGTCTATCCATGAAATACTTGAAAGCGATATATGCAGGGAATCAACAGCAATGAGTTTGGCTGTTGTTTGGCTTTTGAATTCTTCAAATCTCCACTGTATTAGCTACGAAGCTCCGATGGAGTGTGAAAGTTTGTTGTTGGTGACTAAAACAACTCCTCTAAACACTGGTCGTCTGGCATCCTCGGGATGA 1212 0.4431 MHITMVKSSSCLRLITCSGGGEKGQDQRVVYEVKDSNDKRGWSFRKRVARHRMLSNAVIAVTETPTSANKEISEYSSVNFQSPAESIVVEKIYLTTLTHEANPKKPDRSQQTSTPVTATIAAPASPYRSSPSLSPTVQMKCLPDAKPFADYEEESSKVSAHLAHRYSKHCKKAVKAGHESPALVERVYLLTMKVMSPESSLDKLLNLVERNHQLACDLEAEGRGPRSRRSHCFLAPNGTVTDTVPSFLAKCFTSSEVPGDINVLLMQVIHAAFTAFAMFRVPMCKMRDTFGRFFYIVYKWLGVRETFHCNSGTETGTVLYSEPGAAMVGSDRVLCLLGSIWSIHEILESDICRESTAMSLAVVWLLNSSNLHCISYEAPMECESLLLVTKTTPLNTGRLASSG* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3657 403 PANTHER IQ-DOMAIN 5-RELATED 5 105 - -
Psa1g3657 403 PANTHER PROTEIN IQ-DOMAIN 32 5 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3657 Psa-Chr1 309181010 309185768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3657 189 268 C2H2 Transcription Factor Family AT3G47890 41.250 8.47e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3657 - - cam:101492650 119.783