Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3654 ATGGAAAATTTATACAAGTTTGGTGAGTTCAATTTCAGTGCAGTTGAAGACAAACTTAGTTCATCCAATGATATTTTCTGGGAAACAAAGAAACTTACTGAAATAAAAAGTGTTCAATTTTCCGTAGCAGAAAATCTAGGAGATTTTAATGGAAATGAATCTCTATGCTCTAATTTCGGTTTCTTTCAAGATTATCCATCACATGAAGACGAGTTTCTTCTTTCGACCGATCAGCAAAAGTATCAAGATTATGAAACTTTTGATAACCTACAATTCGACATGGTTAACTTCGATGAACAACTATGTCCAACAAAAGTTCTTCCACTTTGTGACATAGAAAATGATAGACAATTCTACCAAACTCCTTTAGCGCCGGTTGAGATATTGAAGAACTATGGCAAAGGATTCAAGAAATTATTGTTACCGGATGAAGGAAAAATTCTTCATCCGGTTAATGATTTCGGTTTAGTCACGAACAACCAAAATGAAAGAAAGTTGTCAACTGCGGATATCATGAAGGTAGCTGGAACGAGATTCATACAATCGTCTTCGGAATCTGCATCATCAGGTTTGATTCTTAATCACCCTTTTGGCTTTTCGTTTTCTGGTTTATCAGATGGAGAGAAAGAAGATGTTTCACTCGCTGAATCACTCTTGGCTTGCGCTGAAAAAGTTGGATATCAACAGTTCGAACGCGCTAGATTTTTCTTACCGCAAATCGAGTCTTTATCTTCGAAGACAGGTAACCCGGTTAAACGCGTGGTTCATTATTTTGCTGAAGCTCTTCGTCAAAGAATCGATAGAGAAACCGGTAGAGTTTCCGTGAAGAATATGCAAAAGGCGGAGTCTTTATTTAATCCCGAAGAAGACACCAAGGATCTAAATCCGACACTTCTCGCGTTTATAGAAGATCTTCCGTTTTGTAAAATTTCAATGTTCACGTGTGTACAAGCTTTGATAGAGAATGTTAAAGATGCAAAGAAGATTCATGTTATTGATCTAGAAATCCGAAAAGGGTTACAATGGACAATCCTAATGCAAGCACTTCAATCAAGAAGCGAATGTCCACTCGAGCTTCTAAAGATAACAGGTATTGCGAGCGGAAACATAGACACCTCGAAGCAAATAGTCGAGGAAACTGGTAAAAGATTGAAAGATTTTGCAAAAAGTTTGAACGTACCTTTCTCCTTCGAAATAGTTGTTGTATCTGATTTATTACATCTAAGAGAAGATCATTTTAAGATAGACTCGGAAGAAACAATCGCTGTTTATTCTCAATATGCACTACGAAACAAGATTCAACAATCAGACCAACTCGAAACAATCATGCGAGTTATTAGAACTATAAACCCTATAGTAATGGTTGTTATAGAGATTGAAGCTAACCACAACTCTAAATCTTTTGTGACACGTTTCATCGAAGCACTATTCTACTTTAGTGCGTTTTTCGATTGTATAGAGGATTGTATGAAAGGGGACGAGGAAAACAGAATGATACTAGAATCAAAGTATTTTGGTCACGGTATAAGGAATACCGTCGCTGAAGAAGGAGTCGAGAGAAAAAGTAGAAATGTTAAGATTGATGTGTGGAGAGCATTTTTTAGTAGATTTGGAATGGTGGAAACAAAATTGAGTATGATGTGTTTGTATCAAGCTGAATTGGTAGCTAAAAGATTTGCTTGTGGAAATTCTTGCACATTTGATATAAATGGAGAGTGTCTTGTTATTGGATGGAAAGGGACACCAATTAACTCTGTTTCTGTTTGGAAGTTTATTTGA 1779 0.3637 MENLYKFGEFNFSAVEDKLSSSNDIFWETKKLTEIKSVQFSVAENLGDFNGNESLCSNFGFFQDYPSHEDEFLLSTDQQKYQDYETFDNLQFDMVNFDEQLCPTKVLPLCDIENDRQFYQTPLAPVEILKNYGKGFKKLLLPDEGKILHPVNDFGLVTNNQNERKLSTADIMKVAGTRFIQSSSESASSGLILNHPFGFSFSGLSDGEKEDVSLAESLLACAEKVGYQQFERARFFLPQIESLSSKTGNPVKRVVHYFAEALRQRIDRETGRVSVKNMQKAESLFNPEEDTKDLNPTLLAFIEDLPFCKISMFTCVQALIENVKDAKKIHVIDLEIRKGLQWTILMQALQSRSECPLELLKITGIASGNIDTSKQIVEETGKRLKDFAKSLNVPFSFEIVVVSDLLHLREDHFKIDSEETIAVYSQYALRNKIQQSDQLETIMRVIRTINPIVMVVIEIEANHNSKSFVTRFIEALFYFSAFFDCIEDCMKGDEENRMILESKYFGHGIRNTVAEEGVERKSRNVKIDVWRAFFSRFGMVETKLSMMCLYQAELVAKRFACGNSCTFDINGECLVIGWKGTPINSVSVWKFI* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3654 592 Pfam GRAS domain family 215 590 IPR005202 -
Psa1g3654 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 590 IPR005202 -
Psa1g3654 592 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 41 590 - -
Psa1g3654 592 ProSiteProfiles GRAS family profile. 205 590 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3654 Psa-Chr1 309098941 309101185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3654 204 591 GRAS Transcription Factor Family AT3G03450 31.139 4.09e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa1g3654 GRAS 3.8e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3654 - - gmx:100798926 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3654 1 309098941 309101185 Psa1g3654 1 309098941 309101185 ECH