Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3641 ATGATGACTCATGATGAGGAAACAAAGAAGTTTTTCAAATATTCTTCTGTCATGTGTGTTTTGGCGCCTCGCTATGCTAGCAGTAAGATGAGCTTCATTAAACAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTGTTGTGGACATACAGGCTTCCGATAGGACAAAAAGTGGAAACGACGGCAAGCTGCAACGCTTCCAAAACCAGTCCAAAATGCAAAAGTTGTGGCAAAACGCAGTTGAAAAGGTATTTCATTTAGAAACTGCTCTCATTCATGCTGCACGACAAGGACACACTGCCACTGCTAAGTATCTCATTGACCATGGTGCTGATCCTACTATTGCTAGCAATTTAGGAGCTACGGCATTGCATCATTCTGCTGGAATGGGAGATATTGAATTGCTTGAGCACTTGCCATCCAAAGGAATTATTCCTGACTTAGAGAACGTGACGATAGTTGAACTTGGAAAAAGGGGAGTGAAAAGTCTGTTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAAGTTGGCACTCGGTATGAAGTCTTCAAAGCTTGCACTGCCGGCGACCTCTTATGGACAACTGTTGAAGCATTGAGAATTGAGAAAGAATACCTTGCTGCTGTTGCTAATTTTGCCATCAAATGCGAGGCCGCCTAG 708 0.4223 MMTHDEETKKFFKYSSVMCVLAPRYASSKMSFIKQQVVGTVFTHHQKCVVVDIQASDRTKSGNDGKLQRFQNQSKMQKLWQNAVEKVFHLETALIHAARQGHTATAKYLIDHGADPTIASNLGATALHHSAGMGDIELLEHLPSKGIIPDLENVTIVELGKRGVKSLLAVPISFVSEHIETLEEIDVEYKEVGTRYEVFKACTAGDLLWTTVEALRIEKEYLAAVANFAIKCEAA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3641 235 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Psa1g3641 235 SUPERFAMILY Chelatase 149 228 - -
Psa1g3641 235 Pfam Ferrochelatase 154 198 IPR001015 GO:0004325|GO:0006783
Psa1g3641 235 Gene3D - 50 144 IPR036770 -
Psa1g3641 235 PANTHER PHOSPHOLIPASE D 1 59 - -
Psa1g3641 235 Pfam Ankyrin repeats (many copies) 92 140 IPR002110 GO:0005515
Psa1g3641 235 SUPERFAMILY Ankyrin repeat 89 153 IPR036770 -
Psa1g3641 235 SMART ANK_2a 122 151 IPR002110 GO:0005515
Psa1g3641 235 SMART ANK_2a 89 118 IPR002110 GO:0005515
Psa1g3641 235 ProSiteProfiles Ankyrin repeat region circular profile. 89 115 - -
Psa1g3641 235 Gene3D - 145 202 - -
Psa1g3641 235 PANTHER PHOSPHOLIPASE D 1 59 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3641 Psa-Chr1 308575055 308577036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3641 1 70 Phospholipase D Gene Family (Wang group) AT4G35790 67.143 2.69e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3641 K01115 - lja:Lj1g3v4996210.1 112.849