Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3638 ATGGGAGTTGAAAAAGAAGGGACTAGAAGTGGAGGTAGTTTTTTCCACTTATTTGATTGGACTTCGAAATCGCGAAAGAAATTATTTGCATCCAAATCAGATTTACCAGAGTCTTTGAAACAGGAAAGGAAATCTAATCACAATGGGGCAATGAGACATCCCTATCTGGTGGATGAAGATGACAATGGTGTAGGGGAATTTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAAGTGATGAAACGTCGGGAACAAGAGCTCCTAATGTAGTTGCGAGGCTTATGGGATTAGATTCTTTGCCTCCTTCTGGTTTCTCTGATCCCTACTCTTCTCCATATTTTGATACCAGATCCCTTCAAGACGAGGCTCAATTCCTTAGGAAAAATCATGAGGAACTGAGAGTATTGAAGGGATCTGGTATAATGGAGGCTCAGCCTCAGAAGACGGTTATTAGGCCGATTGAGAAGTTTCAGAAAGAAGTATTACCTCCGAAGTCAGCTAAATCGATTCCAGTTACGCACCATAAACTTTTGTCCCCTATTAAGAATCCCGGCTTTGTTCCGTCCAACAATGCTGCTTATATAATGGAGGCTGCTGCGAGAATTATCGAACCTGGGTCTTCCCAAGCAAAGGCTAAAGCACATATGGCATCATCGACAGTCTCATTGAGGGTTAAAGATCTTAGAGATAAGTTAGATTCTTCGCAAAAAGGGCCTCTAATTGGGACATCTTCCGTAGCTTTTAGGACTCGAGAGCTTAAAGAAAGAAGAGACATTTCTCAAAGAACAAGCAGGGTTTCAGAACCTTCTCAAAAGTCATCATCAGCCGAATTGAATGCTACAAAGTATTTAAAGGGACAGTCTTTAAACAGAAGCTGGAATGGAACCGCGGAAACATCCGTCAAGTCTCCTACACATGCAGAAGAAGATACTTCTTTGAAGAATAAGGGGAAATCCGCTTCTTTGAACAGAAGCTGGGATGGAACTGCGGAAACATCCGTCAAGTCTCCTACACATGCAGAAGAAGATTCTTCTTTGAAGAATAAAGGGAAATCTGTTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGCTCTACCGGTGGCAGAAGTTTGATGAACCAAAAAGAGCATCTCGACGCGAAATCAAATCAGCCACCTAAGGCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTTGCCAGAATTCTTCTTCTAATGTTCTCAGGCAGAATAATCTGAAACAGAACCATTCAATGGATATGAACGACAAATTAATACCAACTAAGCCGTTGGTTCCCAATTCACAAGGTAGAAAAGTTATAACTGGAGATTCCTCTTACGGCCGGCATAGAAGCTCTAATGGTAAATCCACCGCGAAATCTAAAACTGGATTGAAAAAGTCAGCCGTGGAGGTGACAGATAGCGAAAACGAAATTCTATATACCCGCACAAACAATTTCCCTAGAAAGAAAAGGACTACAGACAAGGACTGGAACGATAGAGTTGTGGATAATTTGTTCATCGATAAAACTCCAAAGCCTGTTAAGCATGAAGAAGTGAAAAAGAAAGACATGGACGTAGTTTCCTTCACATTCACTACACCGTTAACAAGGAGCAGCAGTCCAGGTTTCGAGACACCTCGACAAGGTGTAAAGAATACTAATGATCTTTCATTGGATCAACGCATTAAAAGAGTGTTGCTTGACGCAGACAGTTCGAGGTCTCCGATAGGATATAATGTAATTGGTGGTGACGCCTTAGGTATACTTTTAGAACAGAAACTGAGGGAATTGACAAGTGGAGTTGAAAACTCATCTTCCAGTGATGTTTCTAAAGCGAGGCAACTTTCAAATTCCGCACCAATGTCAAATGATCAAGTAACCAACTTTAATATAGTAAACCTCAATCCAAGATTGCAGCTGAAGAAAGACCAAGACATGTCGTTTTCGGACAGTCTAAGCAGTAGCCGTGGCTCTAACACATCATTCACCAATCATCAAGAATCATCATTGAAACAACATAAATCATGGGGTGATGAGATGGAACCACTGTCATCCAATTGCCGACAACCAAGTCCTGTATCCGTTCTTGAACCGTCTTTTTCAATCGAAAGTTGTGAATCCTCGATGAGCATGGACGTTACTAGTACAGAAGGAAGCAAGATGTTTTCATCTATTCAAGCTCAGGAGATCCATGGCTTTAATTTTTCGAGGAAATTCTATCCCTCAGAATCCGACGCAGAGTTATCTGATTCAGCTTCTTCAACCTCGACCAGGACTATGATTAAGAAGCACGCGGATACATTTTGTATGAAGTTTGGAAGATCATCAAGTACATGGGAGCTAGAATATGTTAAAGAGATACTATGTAATGTTGAGTTGATGTATATAGATTTTTCCCTGGGCCGATCACGCGAGGTTGTGAACTCGCATCTGTTCAGTCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGCGATGACGAATCGAGGATAGAAAGGAAAGTTATATTTGATATTGTGAGTGAATGTATGGATTTGAGATGCAGGAGTTATGTAGGAGGAGGATACAGAATGTGGAGTAAAGGGTTTGAAATGGTGAGAAGAAAAGATTGGTTGGCAAAAGATGTGTACAAGGAGATTTTGGGGTTGAGAGGGATGAGAGATTCAATGGTAGATGAGCTTGTGGACAAGGATTACCAATATGAAAAGTGGTTGGATTATGAGGTTGATGCTTTTGAATTTGGTGAAGAAGTTATGGATCAAATTTTTGATTCTTTGGTTGATGATGTTTTCTATGAAATGTTGCAAGTTTAA 2841 0.4065 MGVEKEGTRSGGSFFHLFDWTSKSRKKLFASKSDLPESLKQERKSNHNGAMRHPYLVDEDDNGVGEFVRGSCDHSYASSVTSDETSGTRAPNVVARLMGLDSLPPSGFSDPYSSPYFDTRSLQDEAQFLRKNHEELRVLKGSGIMEAQPQKTVIRPIEKFQKEVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSSQAKAKAHMASSTVSLRVKDLRDKLDSSQKGPLIGTSSVAFRTRELKERRDISQRTSRVSEPSQKSSSAELNATKYLKGQSLNRSWNGTAETSVKSPTHAEEDTSLKNKGKSASLNRSWDGTAETSVKSPTHAEEDSSLKNKGKSVSLAIQAKVNVQRREGLSSTGGRSLMNQKEHLDAKSNQPPKANAQKNLHRKSSCQNSSSNVLRQNNLKQNHSMDMNDKLIPTKPLVPNSQGRKVITGDSSYGRHRSSNGKSTAKSKTGLKKSAVEVTDSENEILYTRTNNFPRKKRTTDKDWNDRVVDNLFIDKTPKPVKHEEVKKKDMDVVSFTFTTPLTRSSSPGFETPRQGVKNTNDLSLDQRIKRVLLDADSSRSPIGYNVIGGDALGILLEQKLRELTSGVENSSSSDVSKARQLSNSAPMSNDQVTNFNIVNLNPRLQLKKDQDMSFSDSLSSSRGSNTSFTNHQESSLKQHKSWGDEMEPLSSNCRQPSPVSVLEPSFSIESCESSMSMDVTSTEGSKMFSSIQAQEIHGFNFSRKFYPSESDAELSDSASSTSTRTMIKKHADTFCMKFGRSSSTWELEYVKEILCNVELMYIDFSLGRSREVVNSHLFSQLESRKGGFKSDDESRIERKVIFDIVSECMDLRCRSYVGGGYRMWSKGFEMVRRKDWLAKDVYKEILGLRGMRDSMVDELVDKDYQYEKWLDYEVDAFEFGEEVMDQIFDSLVDDVFYEMLQV* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3638 946 MobiDBLite consensus disorder prediction 653 680 - -
Psa1g3638 946 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 323 944 - -
Psa1g3638 946 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 237 325 - -
Psa1g3638 946 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 240 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 367 482 - -
Psa1g3638 946 Pfam Domain of unknown function (DUF4378) 790 938 IPR025486 -
Psa1g3638 946 MobiDBLite consensus disorder prediction 367 381 - -
Psa1g3638 946 PANTHER EXPRESSED PROTEIN 1 240 - -
Psa1g3638 946 PANTHER EXPRESSED PROTEIN 323 944 - -
Psa1g3638 946 PANTHER EXPRESSED PROTEIN 237 325 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 319 338 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 393 431 - -
Psa1g3638 946 Coils Coil 119 139 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 610 632 - -
Psa1g3638 946 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Psa1g3638 946 MobiDBLite consensus disorder prediction 256 354 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 267 305 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 653 701 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 447 475 - -
Psa1g3638 946 MobiDBLite consensus disorder prediction 31 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3638 Psa-Chr1 308524651 308527950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3638 6 944 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 31.275 1.05e-88 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3638 - - gmx:102669513 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3638 1 308524651 308527950 Psa1g3638 1 308524651 308527950 ECH