Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3526 ATGGAAGGTAACAAGGATGAAGCATTGAGATGCGTCCGAATCGCCGAAGAAGCGATTGCTTCAGGTAACAAAGATCGCGCTCTCAAATTCATGAAAATCGCTAAACGTTTAAATCGCCATTTATCGCTTGATTCCTTGTTCACAAAGTGCGAACGGCTAGATTCTCAGTCCGCCGCCTCTTCCTCCGGCGTTGGCGCCTCGCCGGCGAAGGATAAACCGGGGAGAACCAGAGATGGTGGTTTGAGTGTAGAGAAGAGTTACACGGAGGAGAATGTTAAGTTGATTAGGGAAATTAAAGGGAAAAGTGATTACTACTCGATTTTAGGTTTGGAGAAGAGTTCTTCTGTTGAAGAGATTAGGAAGGCTTATAGGAAACTGTCTTTGAAGGTTCATCCTGATAAGAATAAAGCGCCGGGTTCTGAAGACGCTTTTAAGAAAGTTTCTAAGGCGTTTAAGTGTTTGAGTGACGATGGTTCTAGACGAGAGTATGATCAAGGAGGGTTAGTTGATGAATTTGAATCGAGTTATAATCAGCAAAACAGTTTTAGGCGGAGGAGGAGAAGGAATACTACGAGTCATGATGTTTTCGAAGAGGAATTTGATCCTAATGAGATATTTAGAGCTTTCTTTGGACAACCTGATGTGTTTGGGAGGAGAAATCATGTTTATACAACTCGGGGCGGCGGTGGAATGGGTAATCAACATCAGAGGCACGAGGTTCAGGGTGGAGGAGGACATTATCTTATGCTGATGATTCAGCTTCTGCCGTTGTTGCTCATTGTGTTGCTTGCTTACTTGCCCTTTTCGGATCCTGAATATTCCTTGCACAAGAACCAGTCCTATCAGATTCCAAAAGTCACTGAGGATTATGGGGTTCAGTTTTTCGTGAAATCTTCGGCATTTGATGCTAATTATCCGATTGGTAGTTCGGCTCGTGAGACCATTGAGGATAATATTATAAAGGATTATAGGAATATGCTTCGTCGTTATTGTCAAGTGGAGATTCAGAGACGTACTTGGAATAGGAATCTGCCTGTTCCTCACTGTGAAAAGCTTCAAAATTTTGGTGTTGTAGTTTGA 1080 0.4278 MEGNKDEALRCVRIAEEAIASGNKDRALKFMKIAKRLNRHLSLDSLFTKCERLDSQSAASSSGVGASPAKDKPGRTRDGGLSVEKSYTEENVKLIREIKGKSDYYSILGLEKSSSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRREYDQGGLVDEFESSYNQQNSFRRRRRRNTTSHDVFEEEFDPNEIFRAFFGQPDVFGRRNHVYTTRGGGGMGNQHQRHEVQGGGGHYLMLMIQLLPLLLIVLLAYLPFSDPEYSLHKNQSYQIPKVTEDYGVQFFVKSSAFDANYPIGSSARETIEDNIIKDYRNMLRRYCQVEIQRRTWNRNLPVPHCEKLQNFGVVV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3526 359 PANTHER AT29763P-RELATED 1 357 - -
Psa1g3526 359 PANTHER CHAPERONE PROTEIN DNAJ 49 1 357 - -
Psa1g3526 359 Gene3D DnaJ domain 100 221 IPR036869 -
Psa1g3526 359 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
Psa1g3526 359 MobiDBLite consensus disorder prediction 58 83 - -
Psa1g3526 359 CDD DnaJ 103 156 IPR001623 -
Psa1g3526 359 SMART dnaj_3 102 159 IPR001623 -
Psa1g3526 359 SUPERFAMILY Chaperone J-domain 99 211 IPR036869 -
Psa1g3526 359 Pfam DnaJ domain 103 164 IPR001623 -
Psa1g3526 359 Pfam Domain of unknown function (DUF1977) 269 339 IPR015399 -
Psa1g3526 359 PRINTS DnaJ domain signature 105 123 IPR001623 -
Psa1g3526 359 PRINTS DnaJ domain signature 123 138 IPR001623 -
Psa1g3526 359 PRINTS DnaJ domain signature 139 159 IPR001623 -
Psa1g3526 359 PRINTS DnaJ domain signature 159 178 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3526 Psa-Chr1 303925721 303928274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3526 98 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 4.42e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3526 K09518 - gmx:100820432 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3526 1 303925721 303928274 Psa1g3526 1 303925721 303928274 ECH