Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3495 ATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTCGGCTATCAATGCAATGACGACAGAGGTATCCCTTGCAAGGTTGCCAAAGGCTGCAAAATCCTTCCTGAAATGCGAAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCTTTGAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAACGGTGTGATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCTAATTCATTTCGGCGGGTACCCTCTTCGCCATGTCTTGGAATGTTGGACATGCTATCAACTTCTTTCCAAAGTAGTTTGTCGAACCTAAGTTGCAGCCCATCCAGTCCAAGTCATATGCTTGAATACGAGCCTTGTTCGTTAAGACTCATGAGTCCTTCCTCTAGAAATGAAAGTTTTCTCGGTGCTACAGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTATTTTGTGCAATTTATGACGGGTTTAATGGGAGAGATGCGGCGGACTATCTAGCTTGTACTCTTTATGACTCTATTGTATCTTATCTAAATACAATAGATTGGAATTCAGAACCGAATTCCATCAATGCTTCTGACAATGTCGGTTTGGATGGTAGTCGTGTTCTTGATCACGAGCATCAATCTTCATCAGATAAATCATTTTCGAATGTGGTACTTGATAGCCTCAAACATGTTCTTAATCAGGTTGAGAATGACTTCCTGTACATGGTTGAGCAGGAAATGGAGGAGCGTCTGGATTTAGTTTCGATTGGATCTTGCGTTTTGCTCGTGCTTCTTCATGGAAATGATTTGTGTACGCTCAATCTTGGTGATAGCAGAGCAGTGCTTGCAACGTGCAGTACAGGTAACGAAATGAACGGGAGTGAGAGGTTGAGAGCTATTCAGCTTACTGATAGTCATACTGTTGACAATGACAGTGAAAGAACTCGACTTCTTGCCGAGCATCCTGATGATCCTAAGACCATTGTAGCAGGGAGAGTGAAAGGAAAATTGAAGGTTACGCGTGCTTTTGGAGTTGGGTACTTGAAAAAGAAAATTCTGAATGATGCACTAATGGGAATCCTCCGAGTTCAAGATCTTAGAAGCCCACCATACATTTCAACAGATCCATCATTGAACGTGCATAAAATCTCTCCATCCGATCAATTTGTTATAGTTGCAAGTGATGGTTTATTCGACTTCTTCAGCAACGAGGAAGCGGTGAATCTTGTGGAGTCTTACATCTTGCGCAATCCTCACGGTGATCCAGCCAAATATCTCATTGAAGAACTAGTAACAAAAGCAGCTGATTCTGCAGGTTTCAGCACGGAGGAGTTGATGAATGTTCCAGCTGGAAGTAGGCGGAAATATCACGATGACGTTACTGTAATGGTGATCATCCTTGGGATGAATAAACGAACTTCAAAGGCGTCAATTTGCATCTGA 1479 0.426 MLSPEGELKISFGYQCNDDRGIPCKVAKGCKILPEMRRTSSFSCLSGAALSANATLANTNICNGVIGEEILPNLDSPNSFRRVPSSPCLGMLDMLSTSFQSSLSNLSCSPSSPSHMLEYEPCSLRLMSPSSRNESFLGATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADYLACTLYDSIVSYLNTIDWNSEPNSINASDNVGLDGSRVLDHEHQSSSDKSFSNVVLDSLKHVLNQVENDFLYMVEQEMEERLDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATCSTGNEMNGSERLRAIQLTDSHTVDNDSERTRLLAEHPDDPKTIVAGRVKGKLKVTRAFGVGYLKKKILNDALMGILRVQDLRSPPYISTDPSLNVHKISPSDQFVIVASDGLFDFFSNEEAVNLVESYILRNPHGDPAKYLIEELVTKAADSAGFSTEELMNVPAGSRRKYHDDVTVMVIILGMNKRTSKASICI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3495 492 CDD PP2Cc 149 479 IPR001932 -
Psa1g3495 492 SMART PP2C_4 134 477 IPR001932 -
Psa1g3495 492 Gene3D - 105 488 IPR036457 -
Psa1g3495 492 Pfam Protein phosphatase 2C 228 446 IPR001932 -
Psa1g3495 492 ProSiteProfiles PPM-type phosphatase domain profile. 136 479 IPR001932 -
Psa1g3495 492 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 491 - -
Psa1g3495 492 SUPERFAMILY PP2C-like 147 480 IPR036457 -
Psa1g3495 492 PANTHER PROTEIN PHOSPHATASE 2C 2 491 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3495 Psa-Chr1 302420909 302424299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3495 4 492 PP2C-type Phosphatase Gene Family AT3G16560 64.329 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3495 - - gmx:100791404 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3495 1 302420909 302424299 Psa1g3495 1 302420909 302424299 ECH