Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3437 ATGTCTAATTCTTACCTCCGATTTGTGCTTCTTTTGGCTATTTACATAATTTCAGCAAATTCAACTCAACCTTATGTTGAAAACTATGATAATAATGCTGAGTTCACTCTTCAAGTCCCAACATTAGATGAAACAAACTTGGATAATCTCTTATCCTTTGGTTACTACCGTAAAAGTTGTCCTCAATTTGAATCCATCTTGGAAAGCAAAGTCAAAGAATGGATTAAGGAGGATTACACTTTAGCAGCTAGTCTCCTAAGGTTGCACTTCCATGATTGTTCTATTAGGGGTCATGAAAACGTTACTTCCTTGATTGAGTTTTTCCAATCCAAGGGCTTGAATGTTTTGGACTTGGTTGTTCTCTCAGGGGCACATACTATTGGAAGGACATCATGTGGCTCTATTCAATATAGGCTATACAACTACAAAGACACAGGGAAACCAGATCCAACTATCGATCCTCAATACCTAAACTTCTTGAAAAGAAAATGTCGATGGGCTTCGGAGTATGTTGATCTAGATGCAAGGACACCGAAAACCTTTGATGAAAAGTACTATATAAATCTCGAAAAGAAAATGGGATTGTTGTCGACAGATCAATTGTTATATTCTGATCAAAGAACTTCTCCATTGGTTTCGGCAATGGCTTTAGAATCATCGGTTTTCAAGCGCCAGTTTGCGTTTTCGATGTCGAAGTTCGGCGCCATCGATGTTCTTACGGGTGATGATGAAGGAGAAATCAGAACCAACTGCAATTTTGTCAATGCTTATTGA 774 0.3811 MSNSYLRFVLLLAIYIISANSTQPYVENYDNNAEFTLQVPTLDETNLDNLLSFGYYRKSCPQFESILESKVKEWIKEDYTLAASLLRLHFHDCSIRGHENVTSLIEFFQSKGLNVLDLVVLSGAHTIGRTSCGSIQYRLYNYKDTGKPDPTIDPQYLNFLKRKCRWASEYVDLDARTPKTFDEKYYINLEKKMGLLSTDQLLYSDQRTSPLVSAMALESSVFKRQFAFSMSKFGAIDVLTGDDEGEIRTNCNFVNAY* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3437 257 Gene3D - 234 255 - -
Psa1g3437 257 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 PANTHER PEROXIDASE 25-RELATED 96 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 PANTHER PEROXIDASE 25-RELATED 44 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 ProSiteProfiles Plant heme peroxidase family profile. 50 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 SUPERFAMILY Heme-dependent peroxidases 51 255 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 PANTHER PEROXIDASE 44 97 - -
Psa1g3437 257 PANTHER PEROXIDASE 96 254 - -
Psa1g3437 257 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 ProSitePatterns Peroxidases proximal heme-ligand signature. 117 127 IPR019793 -
Psa1g3437 257 Gene3D - 50 101 - -
Psa1g3437 257 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601
Psa1g3437 257 ProSiteProfiles Plant heme peroxidase family profile. 100 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 Pfam Peroxidase 99 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa1g3437 257 Gene3D Peroxidase, domain 2 102 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3437 Psa-Chr1 299044872 299046202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3437 47 97 Peroxidase AT1G30870 56.863 3.79e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3437 K00430 - gmx:100798229 278.1