LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa1g3396	ATGATGATGGGTAGTAGTAGTATATATTCATCATCATCATCAAGAGGTGGTGGAGAGATGGACATAGACATGAACATGAACATGATGAATATGAAACCTGCATGGCTAGAGAGGTTGATGGATGAAACATTCTTTGGAGATTGTGGGGTCCACAAAAATCGAAGGAAGAACGAGAAGAACATTTTTTGCTTACACTGTTGTCTTAGCATCTGCCCCCACTGCTTATCTTCTCATACCTCTCATCCTCTTCTCCAGGTGAGAAGGTATGTTTACCACAATGTAATTCGATTGGATGATCTGGAAAAGCTCATAGATTGTTCCAATATTCAGCCCTATACTATTAACAGTGCGAAAGTGATATTTTTAAACCAGAGGCCACAATCAAGGTCATGCAAAGTTACAGCCAATGTTTGCTTCACTTGTGACAGAATTCTTCAGGATCCATTCCATTTCTGTTCTCTCTCATGCAAGGTAGAATACATGGTGTATGAGGGTGAAAATTTGTCGAACATTTTACATCGATTTGATGAATCTGACTTTGCAATATCGCAATTCGAGGGACTAAGAGTGGATGGATCTGAGGTAATTGATGAAGATAACAATCAGATTGGGCCAAGTTCTTCAAATTACTCCATCATCAATGAAGATCAGGCCACCAGCAACAATAGATTCCTCCCTCTCCCTCTCCCTGCCATTGTCCTCTCTCTTGGTAGCAGAAGAAAAGGTGCTCCTCAAAGGGCCCCACTCTCCTAA	753	0.4117	MMMGSSSIYSSSSSRGGGEMDIDMNMNMMNMKPAWLERLMDETFFGDCGVHKNRRKNEKNIFCLHCCLSICPHCLSSHTSHPLLQVRRYVYHNVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRSCKVTANVCFTCDRILQDPFHFCSLSCKVEYMVYEGENLSNILHRFDESDFAISQFEGLRVDGSEVIDEDNNQIGPSSSNYSIINEDQATSNNRFLPLPLPAIVLSLGSRRKGAPQRAPLS*	251

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa1g3396	250	PANTHER	-	33	250	-	-
	Psa1g3396	250	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	33	250	-	-
	Psa1g3396	250	Pfam	PLATZ transcription factor	87	158	IPR006734	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa1g3396	Psa-Chr1	297027596	297033756	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Psa1g3396		PLATZ	6e-28	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa1g3396	-		-	ccaj:109804478	365.925